RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 NIPAL3Q6P499 406 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 OR5L1Q8NGL2 311 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 PTERQ96BW5 349 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 MMP28Q9H239 520 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 INIPQ9NRY2 104 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 ZNF355PQ9NSJ1 428 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 D6RAR5 112 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 E7ESA3 106 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 CYB5BO43169 146 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 ALDOBP05062 364 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 HOXA9P31269 272 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 HOXC5Q00444 222 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 SFRP5Q5T4F7 317 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 PM20D1Q6GTS8 502 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 MYLIPQ8WY64 445 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 DTD2Q96FN9 168 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 VRK1Q99986 396 aaPredicted RBP17.44■□□□□ 0.38
VARS2-209ENST00000477288 KLF16Q9BXK1 252 aaPredicted RBP17.44■□□□□ 0.38
VARS2-209ENST00000477288 THSD1Q9NS62 852 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 SDHAF2Q9NX18 166 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 SLC35A3Q9Y2D2 325 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 PCDHGA1Q9Y5H4 931 aa17.44■□□□□ 0.38
VARS2-209ENST00000477288 LOC105369274A0A096LPK9 316 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 ENSAO43768 121 aaKnown RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 MGAT3Q09327 533 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 FGFBP1Q14512 234 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 CNIH2Q6PI25 160 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 FAM83HQ6ZRV2 1179 aaPredicted RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 TSPYL5Q86VY4 417 aaPredicted RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 OR4N4Q8N0Y3 316 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 MDGA1Q8NFP4 955 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 OR2T35Q8NGX2 323 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 ADAMTS19Q8TE59 1207 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 OR2T1O43869 369 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 AKAIN1P0CW23 69 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 SSTR4P31391 388 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 WNT4P56705 351 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 PAN3Q58A45 887 aaKnown RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 KANSL1Q7Z3B3 1105 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 LRRC18Q8N456 261 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 PNPLA1Q8N8W4 532 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 MUCL1Q96DR8 90 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 CHFRQ96EP1 664 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 INTS14Q96SY0 518 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 ACKR4Q9NPB9 350 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 PROZP22891 400 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 RPS18P62269 152 aaKnown RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 RUNX2Q13950 521 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 PRSS48Q7RTY5 328 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 OR2A12Q8NGT7 310 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 NAT6Q93015 286 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 CACNG2Q9Y698 323 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 ARPC1BO15143 372 aaKnown RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 DENRO43583 198 aaKnown RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 ZP2Q05996 745 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 SF3A2Q15428 464 aaKnown RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 KIAA0907Q7Z7F0 614 aaPredicted RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 ATOH1Q92858 354 aaPredicted RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 NUDT22Q9BRQ3 303 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 ZNF223Q9UK11 482 aaPredicted RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 BCAT2O15382 392 aaPredicted RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 ZFAND5O76080 213 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 ARHGEF15O94989 841 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 NUDT1P36639 197 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 RPS5P46782 204 aaKnown RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 MANEAQ5SRI9 462 aa17.43■□□□□ 0.38
VARS2-209ENST00000477288 BOKQ9UMX3 212 aaPredicted RBP17.43■□□□□ 0.38
VARS2-209ENST00000477288 B4DXG7 233 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 UGDHO60701 494 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 GYPBP06028 91 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 CSF1P09603 554 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 CRHBPP24387 322 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 HTR3AP46098 478 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 EFNA3P52797 238 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 CTBSQ01459 385 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 C2orf76Q3KRA6 126 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 LDLRAD1Q5T700 205 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 CD163Q86VB7 1156 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 GRAMD2AQ8IUY3 354 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 OR5D14Q8NGL3 314 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 ZNF417Q8TAU3 575 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 COQ10AQ96MF6 247 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 CBLCQ9ULV8 474 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 TMPRSS7Q7RTY8 843 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 DNAJB6O75190 326 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 EVI2BP34910 448 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 MBTPS1Q14703 1052 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 ZNF845Q96IR2 970 aaPredicted RBP17.42■□□□□ 0.38
VARS2-209ENST00000477288 KLHL42Q9P2K6 505 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 BAZ2AQ9UIF9 1905 aaKnown RBP17.42■□□□□ 0.38
VARS2-209ENST00000477288 TRAV27A0A087WT01 109 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 ZNF789Q5FWF6 425 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 OR13J1Q8NGT2 312 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 NT5C3BQ969T7 300 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 TAAR2Q9P1P5 351 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 IGKV6-21A0A0C4DH24 114 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 AP1G1O43747 822 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 SELENOWP63302 87 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 SLC14A1Q13336 389 aa17.42■□□□□ 0.38
VARS2-209ENST00000477288 COQ5Q5HYK3 327 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms