RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 GTDC1Q4AE62 458 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 GPAT3Q53EU6 434 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 EEF1A1P5Q5VTE0 462 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 ESPNLQ6ZVH7 1005 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 ZNF619Q8N2I2 560 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 LINC01560Q8TB33 94 aa18.98■□□□□ 0.63
LIME1-204ENST00000476183 THUMPD3Q9BV44 507 aaKnown RBP18.98■□□□□ 0.63
LIME1-204ENST00000476183 QRSL1Q9H0R6 528 aaKnown RBP18.98■□□□□ 0.63
LIME1-204ENST00000476183 GPC6Q9Y625 555 aaPredicted RBP18.98■□□□□ 0.63
LIME1-204ENST00000476183 ETV2O00321 342 aaPredicted RBP18.97■□□□□ 0.63
LIME1-204ENST00000476183 POLR3GO15318 223 aaPredicted RBP18.97■□□□□ 0.63
LIME1-204ENST00000476183 CYP7B1O75881 506 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 CHRM4P08173 479 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 UBTFL6P0CB48 400 aaPredicted RBP18.97■□□□□ 0.63
LIME1-204ENST00000476183 CAPN3P20807 821 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 ME2P23368 584 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 SFTPDP35247 375 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 PGM1P36871 562 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 CPA2P48052 419 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 MRPL19P49406 292 aaKnown RBP18.97■□□□□ 0.63
LIME1-204ENST00000476183 AQP5P55064 265 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 SORDQ00796 357 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 PLAURQ03405 335 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 CBFBQ13951 182 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 MAPK11Q15759 364 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 SLC25A53Q5H9E4 307 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 PPP4R4Q6NUP7 873 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 MSANTD1Q6ZTZ1 278 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 EIF3MQ7L2H7 374 aaKnown RBP18.97■□□□□ 0.63
LIME1-204ENST00000476183 TMEM200AQ86VY9 491 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 KIF18BQ86Y91 864 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 FAM71CQ8NEG0 241 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 TOR1AIP2Q8NFQ8 470 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 FAM222BQ8WU58 562 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 CKAP2Q8WWK9 683 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 KLHL15Q96M94 604 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 TRNT1Q96Q11 434 aaKnown RBP18.97■□□□□ 0.63
LIME1-204ENST00000476183 SLC38A1Q9H2H9 487 aa18.97■□□□□ 0.63
LIME1-204ENST00000476183 FAM234BA2RU67 622 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 TUBAL3A6NHL2 446 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 CLDN24A6NM45 220 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 MSTNO14793 375 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 SMNDC1O75940 238 aaKnown RBP eCLIP18.96■□□□□ 0.63
LIME1-204ENST00000476183 CGAP01215 116 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 FCGR2AP12318 317 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 TXNL4AP83876 142 aaKnown RBP18.96■□□□□ 0.63
LIME1-204ENST00000476183 HBMQ6B0K9 141 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 ZNF474Q6S9Z5 364 aaPredicted RBP18.96■□□□□ 0.63
LIME1-204ENST00000476183 FUNDC1Q8IVP5 155 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 OIT3Q8WWZ8 545 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 OSTF1Q92882 214 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 AURKBQ96GD4 344 aaPredicted RBP18.96■□□□□ 0.63
LIME1-204ENST00000476183 ITCHQ96J02 903 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 MRGPRX4Q96LA9 322 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 CCDC28BQ9BUN5 200 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 OPN3Q9H1Y3 402 aaPredicted RBP18.96■□□□□ 0.63
LIME1-204ENST00000476183 CLEC4AQ9UMR7 237 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 LIPT1Q9Y234 373 aa18.96■□□□□ 0.63
LIME1-204ENST00000476183 FAM221AA4D161 298 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 CTAG2O75638 210 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 KRT75O95678 551 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 ZCCHC18P0CG32 403 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 NID1P14543 1247 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 CPOXP36551 454 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 HPCAP84074 193 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 TMEM176BQ3YBM2 270 aaPredicted RBP18.95■□□□□ 0.62
LIME1-204ENST00000476183 LRRC74BQ6ZQY2 392 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 ATP6V1C2Q8NEY4 427 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 GTF2H4Q92759 462 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 MAGEB18Q96M61 343 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 GPATCH1Q9BRR8 931 aaKnown RBP18.95■□□□□ 0.62
LIME1-204ENST00000476183 SRXN1Q9BYN0 137 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 PRRG4Q9BZD6 226 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 RMND5AQ9H871 391 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 COQ10BQ9H8M1 238 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 TPT1P8Q9HAU6 139 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 PAQR5Q9NXK6 330 aaPredicted RBP18.95■□□□□ 0.62
LIME1-204ENST00000476183 MCTS1Q9ULC4 181 aaKnown RBP18.95■□□□□ 0.62
LIME1-204ENST00000476183 SLC35A3Q9Y2D2 325 aa18.95■□□□□ 0.62
LIME1-204ENST00000476183 ADAM11O75078 769 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 ETFAP13804 333 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 CD1EP15812 388 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 ANXA11P50995 505 aaKnown RBP18.94■□□□□ 0.62
LIME1-204ENST00000476183 CARD18P57730 90 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 SESN3P58005 492 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 KCNJ10P78508 379 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 FAM27E3Q08E93 113 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 C6orf10Q5SRN2 563 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 SLC2A7Q6PXP3 512 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 FAM214BQ7L5A3 538 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 NRGNQ92686 78 aa18.94■□□□□ 0.62
LIME1-204ENST00000476183 PAIP1Q9H074 479 aaKnown RBP18.94■□□□□ 0.62
LIME1-204ENST00000476183 AGAP5A6NIR3 686 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 A6NNC1 897 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 SYNGR4O95473 234 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 ANP32DO95626 131 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 NR2F1P10589 423 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 EPXP11678 715 aa18.93■□□□□ 0.62
LIME1-204ENST00000476183 HOXB9P17482 250 aaPredicted RBP18.93■□□□□ 0.62
LIME1-204ENST00000476183 STX1BP61266 288 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms