RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 J3QR89 54 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 PHYHO14832 338 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 SGCEO43556 437 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 GPR137BO60478 399 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 IL1AP01583 271 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 CD53P19397 219 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 KITLGP21583 273 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 DRD5P21918 477 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 FLT3LGP49771 235 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TPRG1Q6ZUI0 275 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 OTOP2Q7RTS6 562 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TRAPPC6BQ86SZ2 158 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 NPAS4Q8IUM7 802 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 GPR137CQ8N3F9 429 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TMEM185AQ8NFB2 350 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 DAZLQ92904 295 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 PTP4A1Q93096 173 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 MSI2Q96DH6 328 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 LURAP1Q96LR2 239 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 NICN1Q9BSH3 213 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 SLC6A17Q9H1V8 727 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TEX10Q9NXF1 929 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 PTP4A3O75365 173 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 KNG1P01042 644 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 PGCP20142 388 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ADRA1AP35348 466 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 AGTR2P50052 363 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 RPS13P62277 151 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 POLR2GP62487 172 aaKnown RBP eCLIP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ARHGAP19Q14CB8 494 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 METTL11BQ5VVY1 283 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 FAHD1Q6P587 224 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 DUSP18Q8NEJ0 188 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 NT5C3BQ969T7 300 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 SGTBQ96EQ0 304 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 SDSLQ96GA7 329 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ZNF681Q96N22 645 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 MRIQ9BWK5 157 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 MS4A7Q9GZW8 240 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 REEP4Q9H6H4 257 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 RXFP3Q9NSD7 469 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 RBFOX1Q9NWB1 397 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 MARCH4Q9P2E8 410 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ZNF223Q9UK11 482 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 NOSIPQ9Y314 301 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ACTL7AQ9Y615 435 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 PARP14Q460N5 1801 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 CD300LBA8K4G0 201 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 CASC3O15234 703 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 GPR37L1O60883 481 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 S1PR4O95977 384 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 GAAP10253 952 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 KDELR2P33947 212 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 CLDN20P56880 219 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 RUNX2Q13950 521 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TUSC1Q2TAM9 212 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 DACT2Q5SW24 774 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 LCN10Q6JVE6 187 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ARHGAP11AQ6P4F7 1023 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TRILQ7L0X0 811 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 OR11H4Q8NGC9 324 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 OR4K1Q8NGD4 311 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 OR5P2Q8WZ92 322 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 TAAR8Q969N4 342 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 WBP1Q96G27 269 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ZC3HAV1LQ96H79 300 aaKnown RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 NPY6RQ99463 290 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 KCNH6Q9H252 994 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 PRTFDC1Q9NRG1 225 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 CA5BQ9Y2D0 317 aa10.84□□□□□ -0.67
U2AF1-209ENST00000475639 KLF2Q9Y5W3 355 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-209ENST00000475639 EFCAB7A8K855 629 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 CA12O43570 354 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 RPS17P08708 135 aaKnown RBP10.83□□□□□ -0.68
U2AF1-209ENST00000475639 RPS10P46783 165 aaKnown RBP10.83□□□□□ -0.68
U2AF1-209ENST00000475639 SNU13P55769 128 aaKnown RBP10.83□□□□□ -0.68
U2AF1-209ENST00000475639 ARSIQ5FYB1 569 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF585AQ6P3V2 769 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 CLDN19Q8N6F1 224 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 SORCS2Q96PQ0 1159 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 P2RY13Q9BPV8 354 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 DOHHQ9BU89 302 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 SHARPINQ9H0F6 387 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 IL21RQ9HBE5 538 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 SNAPINO95295 136 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 RPL23AP62750 156 aaKnown RBP10.83□□□□□ -0.68
U2AF1-209ENST00000475639 KCNIP4Q6PIL6 250 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 C6orf120Q7Z4R8 191 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 KLBQ86Z14 1044 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 SUMF2Q8NBJ7 301 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 RHEBL1Q8TAI7 183 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 BCL7CQ8WUZ0 217 aaPredicted RBP10.83□□□□□ -0.68
U2AF1-209ENST00000475639 KIAA1191Q96A73 305 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 KCNIP2Q9NS61 270 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 GFOD1Q9NXC2 390 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 KCMF1Q9P0J7 381 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 A0A1W2PQL4 384 aaPredicted RBP10.83□□□□□ -0.68
U2AF1-209ENST00000475639 SLC38A8A6NNN8 435 aa10.83□□□□□ -0.68
U2AF1-209ENST00000475639 PRAF2O60831 178 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms