RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 GIMAP5Q96F15 307 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 KCNA7Q96RP8 456 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 STACQ99469 402 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 INPP5KQ9BT40 448 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 BTBD2Q9BX70 525 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 CDC42EP4Q9H3Q1 356 aaKnown RBP11.12□□□□□ -0.63
SKA3-206ENST00000475251 CXorf36Q9H7Y0 433 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 ZDHHC18Q9NUE0 388 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 NPAP1Q9NZP6 1156 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 EMC3Q9P0I2 261 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 FKBP7Q9Y680 259 aa11.12□□□□□ -0.63
SKA3-206ENST00000475251 ESYT3A0FGR9 886 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 CIB4A0PJX0 185 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 GTPBP1O00178 669 aaKnown RBP11.11□□□□□ -0.63
SKA3-206ENST00000475251 PGRP06401 933 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 PRKCAP17252 672 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 IGFBP5P24593 272 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 CD40P25942 277 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 DUSP5Q16690 384 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 FAM120AOSQ5T036 256 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 C8orf74Q6P047 294 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 ZAR1Q86SH2 424 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 ATP6V1C2Q8NEY4 427 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 FBXO30Q8TB52 745 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 DCAKDQ8WVC6 231 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 CHMP6Q96FZ7 201 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 CHODLQ9H9P2 273 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 FKRPQ9H9S5 495 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 DUSP22Q9NRW4 184 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 ACSS1Q9NUB1 689 aaPredicted RBP11.11□□□□□ -0.63
SKA3-206ENST00000475251 GIN1Q9NXP7 522 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 TMEM216Q9P0N5 145 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 ICAM5Q9UMF0 924 aa11.11□□□□□ -0.63
SKA3-206ENST00000475251 ANK2Q01484 3957 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 IGHV3-15A0A0B4J1V0 119 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 LOC100289279A0A1B0GTE1 492 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 EFNA2O43921 213 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 TBX19O60806 448 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 RAD51DO75771 328 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 GSTA1P08263 222 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 PDLIM4P50479 330 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 CSNK2A1P68400 391 aaPredicted RBP11.1□□□□□ -0.63
SKA3-206ENST00000475251 CBFBQ13951 182 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 CCNJQ5T5M9 372 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 C1QTNF12Q5T7M4 302 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 FBXW9Q5XUX1 488 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 OR7E24Q6IFN5 339 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 TIFABQ6ZNK6 161 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 UBE2J2Q8N2K1 259 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 ZNF433Q8N7K0 673 aaPredicted RBP11.1□□□□□ -0.63
SKA3-206ENST00000475251 ARIH2OSQ8N7S6 290 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 TOR1AIP2Q8NFQ8 470 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 OR52N5Q8NH56 324 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 CIDECQ96AQ7 238 aaPredicted RBP11.1□□□□□ -0.63
SKA3-206ENST00000475251 PIMREGQ9BSJ6 248 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 REEP4Q9H6H4 257 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 MYOZ1Q9NP98 299 aaPredicted RBP11.1□□□□□ -0.63
SKA3-206ENST00000475251 SERINC1Q9NRX5 453 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 SH3BP4Q9P0V3 963 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 ING1Q9UK53 422 aaPredicted RBP11.1□□□□□ -0.63
SKA3-206ENST00000475251 CARD8Q9Y2G2 431 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 YLPM1P49750 1951 aaKnown RBP11.1□□□□□ -0.63
SKA3-206ENST00000475251 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
SKA3-206ENST00000475251 CADP27708 2225 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 A0A087WUV0 522 aaPredicted RBP11.09□□□□□ -0.63
SKA3-206ENST00000475251 CCT8L1PA6NM43 557 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 M0R1B8 84 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 SMAD9O15198 467 aaKnown RBP11.09□□□□□ -0.63
SKA3-206ENST00000475251 SEC22BO75396 215 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 KRT16P08779 473 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 PRPH2P23942 346 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 FRKP42685 505 aaPredicted RBP11.09□□□□□ -0.63
SKA3-206ENST00000475251 ZNF83P51522 516 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 FOXA1P55317 472 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 SLC7A5Q01650 507 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 CHRNEQ04844 493 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 GGTLC2Q14390 218 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 PDK3Q15120 406 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 KLHL26Q53HC5 615 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 CBLN3Q6UW01 205 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 LRIG3Q6UXM1 1119 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 RFLNBQ8N5W9 214 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 TMCO5AQ8N6Q1 288 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 CCNYL1Q8N7R7 359 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 OR5W2Q8NH69 310 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 GPR119Q8TDV5 335 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 HTRA1Q92743 480 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 APH1AQ96BI3 265 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 EGLN2Q96KS0 407 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 OR5B2Q96R09 309 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 ZNF300Q96RE9 604 aaPredicted RBP11.09□□□□□ -0.63
SKA3-206ENST00000475251 CCT7Q99832 543 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 KLHDC3Q9BQ90 382 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 TRMOQ9BU70 441 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 PIGUQ9H490 435 aa11.09□□□□□ -0.63
SKA3-206ENST00000475251 GSTO2Q9H4Y5 243 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms