RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 RNF122Q9H9V4 155 aa21.58■■□□□ 1.05
CPNE1-223ENST00000475146 TPT1P8Q9HAU6 139 aa21.58■■□□□ 1.05
CPNE1-223ENST00000475146 PAQR5Q9NXK6 330 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-223ENST00000475146 SLC35A3Q9Y2D2 325 aa21.58■■□□□ 1.05
CPNE1-223ENST00000475146 ITPR2Q14571 2701 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 A0A0J9YW62 118 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 SMNDC1O75940 238 aaKnown RBP eCLIP21.57■■□□□ 1.04
CPNE1-223ENST00000475146 AQP8O94778 261 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 SYNGR4O95473 234 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 SHC1P29353 583 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 KIF18BQ86Y91 864 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 ZZZ3Q8IYH5 903 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 ZG16BQ96DA0 208 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 ADGRG7Q96K78 797 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 SLC38A1Q9H2H9 487 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-223ENST00000475146 ZNF446Q9NWS9 450 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 CCDC167Q9P0B6 97 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 P2RX2Q9UBL9 471 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 MCTS1Q9ULC4 181 aaKnown RBP21.57■■□□□ 1.04
CPNE1-223ENST00000475146 ADGRG4Q8IZF6 3080 aa21.57■■□□□ 1.04
CPNE1-223ENST00000475146 ADAMDEC1O15204 470 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 ETFAP13804 333 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 CPOXP36551 454 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 PGM1P36871 562 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 MAGEA8P43361 318 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 SLC6A8P48029 635 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 VWA1Q6PCB0 445 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 LRRC74BQ6ZQY2 392 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 TMEM200AQ86VY9 491 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 GTF2H4Q92759 462 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 ZNF524Q96C55 264 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 NPHS2Q9NP85 383 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 GALNT8Q9NY28 637 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 CRIM1Q9NZV1 1036 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 DCTN4Q9UJW0 460 aa21.56■■□□□ 1.04
CPNE1-223ENST00000475146 UQCRHLA0A096LP55 91 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 GJE1A6NN92 205 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 EDF1O60869 148 aaKnown RBP21.55■■□□□ 1.04
CPNE1-223ENST00000475146 BCAS1O75363 584 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-223ENST00000475146 PGCP20142 388 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 MVDP53602 400 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 KRTAP10-9P60411 292 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 DSTNP60981 165 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 KCNJ10P78508 379 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 SELENBP1Q13228 472 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 SQLEQ14534 574 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 FAM71CQ8NEG0 241 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 SPDL1Q96EA4 605 aa21.55■■□□□ 1.04
CPNE1-223ENST00000475146 ABCA12Q86UK0 2595 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 TUBAL3A6NHL2 446 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 CLDN24A6NM45 220 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 EFNA2O43921 213 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 NTN1O95631 604 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 PLGP00747 810 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-223ENST00000475146 RYKP34925 604 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 KIR2DL2P43627 348 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-223ENST00000475146 ATP4BP51164 291 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 CARD18P57730 90 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 TMEM176BQ3YBM2 270 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-223ENST00000475146 AGKQ53H12 422 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 SLC25A53Q5H9E4 307 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 AP1ARQ63HQ0 302 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 BLOC1S3Q6QNY0 202 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 BTLAQ7Z6A9 289 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 FUNDC1Q8IVP5 155 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 ZNF563Q8TA94 476 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 TMEM234Q8WY98 164 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 ST8SIA1Q92185 356 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 OSTF1Q92882 214 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 STARD4Q96DR4 205 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 PAIP1Q9H074 479 aaKnown RBP21.54■■□□□ 1.04
CPNE1-223ENST00000475146 CLEC4AQ9UMR7 237 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 PCDHB14Q9Y5E9 798 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 HEATR5AQ86XA9 2040 aa21.54■■□□□ 1.04
CPNE1-223ENST00000475146 AGAP5A6NIR3 686 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 A8MXE2 369 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 MSTNO14793 375 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 BCHEP06276 602 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 NCF2P19878 526 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-223ENST00000475146 SLC7A1P30825 629 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 SESN3P58005 492 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 IRX1P78414 480 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-223ENST00000475146 SORDQ00796 357 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 GNA13Q14344 377 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 ARFGAP2Q8N6H7 521 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 WDR60Q8WVS4 1066 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 MTHFD2LQ9H903 347 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-223ENST00000475146 TIGARQ9NQ88 270 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 CALML5Q9NZT1 146 aa21.53■■□□□ 1.04
CPNE1-223ENST00000475146 A0A096LPI6 279 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 TMEM247A6NEH6 219 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 CLIC1O00299 241 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 DNAJA2O60884 412 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 IL7RP16871 459 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 CAPN3P20807 821 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 CRISP3P54108 245 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 CTBP2P56545 445 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 MERTKQ12866 999 aa21.52■■□□□ 1.04
CPNE1-223ENST00000475146 C3orf33Q6P1S2 294 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms