RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ZNF814B7Z6K7 855 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 C9JVG2 144 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 RGS14O43566 566 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 UROSP10746 265 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 SDC1P18827 310 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 LCN1P31025 176 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 OR3A2P47893 321 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 P2RX1P51575 399 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 CCR4P51679 360 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 KIAA0040Q15053 153 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 TOMM34Q15785 309 aaPredicted RBP12.39□□□□□ -0.43
CCDC78-209ENST00000474647 AGAP6Q5VW22 663 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 CLEC2AQ6UVW9 174 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 ZYG11AQ6WRX3 759 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 MTERF4Q7Z6M4 381 aaKnown RBP12.39□□□□□ -0.43
CCDC78-209ENST00000474647 SLC43A2Q8N370 569 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 ZNF527Q8NB42 609 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 HTRA1Q92743 480 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
CCDC78-209ENST00000474647 MUCL1Q96DR8 90 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
CCDC78-209ENST00000474647 CCT7Q99832 543 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
CCDC78-209ENST00000474647 PSD2Q9BQI7 771 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 CACNG6Q9BXT2 260 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 CXorf36Q9H7Y0 433 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 GP6Q9HCN6 339 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 ZCCHC3Q9NUD5 404 aaKnown RBP12.39□□□□□ -0.43
CCDC78-209ENST00000474647 ZNF446Q9NWS9 450 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 BAIAP2L1Q9UHR4 511 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 POU2F3Q9UKI9 436 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 EMCNQ9ULC0 261 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 B3GALT5Q9Y2C3 310 aa12.39□□□□□ -0.43
CCDC78-209ENST00000474647 GPC6Q9Y625 555 aaPredicted RBP12.39□□□□□ -0.43
CCDC78-209ENST00000474647 G3V2L1 256 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 H3BNH8 94 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 H3BQF6 201 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 GTPBP1O00178 669 aaKnown RBP12.38□□□□□ -0.43
CCDC78-209ENST00000474647 SLC28A1O00337 649 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 GLRA3O75311 464 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 SASH3O75995 380 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 HSPA4LO95757 839 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 HMGN2P05204 90 aaKnown RBP12.38□□□□□ -0.43
CCDC78-209ENST00000474647 THBS1P07996 1170 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 FAM157CP0CG43 387 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 PRKCAP17252 672 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 PRPH2P23942 346 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 EDNRAP25101 427 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 FRKP42685 505 aaPredicted RBP12.38□□□□□ -0.43
CCDC78-209ENST00000474647 IRX1P78414 480 aaPredicted RBP12.38□□□□□ -0.43
CCDC78-209ENST00000474647 RASGEF1BQ0VAM2 473 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 SELENBP1Q13228 472 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 LASP1Q14847 261 aaKnown RBP12.38□□□□□ -0.43
CCDC78-209ENST00000474647 TMEM249Q2WGJ8 235 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 GALNTL6Q49A17 601 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 CDC73Q6P1J9 531 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 ZCCHC12Q6PEW1 402 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 DTX2Q86UW9 622 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 CCDC63Q8NA47 563 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 ACMSDQ8TDX5 336 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 FAM120BQ96EK7 910 aaKnown RBP12.38□□□□□ -0.43
CCDC78-209ENST00000474647 ZNF300Q96RE9 604 aaPredicted RBP12.38□□□□□ -0.43
CCDC78-209ENST00000474647 BCO1Q9HAY6 547 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 ACSS1Q9NUB1 689 aaPredicted RBP12.38□□□□□ -0.43
CCDC78-209ENST00000474647 NPAP1Q9NZP6 1156 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 NTMQ9P121 344 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 DCDC2Q9UHG0 476 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 CDC42EP3Q9UKI2 254 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 CCL27Q9Y4X3 112 aa12.38□□□□□ -0.43
CCDC78-209ENST00000474647 ANK2Q01484 3957 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 RAD51DO75771 328 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 GGT1P19440 569 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 IGHV1-2P23083 117 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 CASP9P55211 416 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 SUMO3P55854 103 aaPredicted RBP12.37□□□□□ -0.43
CCDC78-209ENST00000474647 NAA20P61599 178 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 SPOCK1Q08629 439 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 TP53BP2Q13625 1128 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 SLC22A25Q6T423 547 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 DNAJC14Q6Y2X3 702 aaPredicted RBP12.37□□□□□ -0.43
CCDC78-209ENST00000474647 ZNF100Q8IYN0 542 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 OR2T11Q8NH01 316 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 OR52N5Q8NH56 324 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 ZNF764Q96H86 408 aaPredicted RBP12.37□□□□□ -0.43
CCDC78-209ENST00000474647 METTL2AQ96IZ6 378 aaKnown RBP12.37□□□□□ -0.43
CCDC78-209ENST00000474647 OR5B2Q96R09 309 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 STACQ99469 402 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 BEX2Q9BXY8 128 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 MANSC1Q9H8J5 431 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 ICAM5Q9UMF0 924 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 SVEP1Q4LDE5 3571 aa12.37□□□□□ -0.43
CCDC78-209ENST00000474647 A0A1W2PPM1 405 aa12.36□□□□□ -0.43
CCDC78-209ENST00000474647 SMAD9O15198 467 aaKnown RBP12.36□□□□□ -0.43
CCDC78-209ENST00000474647 RGS16O15492 202 aaPredicted RBP12.36□□□□□ -0.43
CCDC78-209ENST00000474647 TBX19O60806 448 aa12.36□□□□□ -0.43
CCDC78-209ENST00000474647 IGHV3-9P01782 118 aa12.36□□□□□ -0.43
CCDC78-209ENST00000474647 PROCP04070 461 aa12.36□□□□□ -0.43
CCDC78-209ENST00000474647 C8BP07358 591 aa12.36□□□□□ -0.43
CCDC78-209ENST00000474647 MYZAPP0CAP1 466 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms