RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 KLHL13Q9P2N7 655 aa18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 V9GYY5 206 aaPredicted RBP18.17■□□□□ 0.5
PDLIM4-206ENST00000474421 ROS1P08922 2347 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 PRSS51A0A1B0GVH4 220 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 SERINC4A6NH21 518 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 ETV2O00321 342 aaPredicted RBP18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 EFNA2O43921 213 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 PRKD3O94806 890 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 NTN1O95631 604 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 THBDP07204 575 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 DHRS4L1P0CG22 281 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 NID1P14543 1247 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 SLC7A1P30825 629 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 RNF144AP50876 292 aaPredicted RBP18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 CCR4P51679 360 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 CLNS1AP54105 237 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 RPS26P62854 115 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 QPRTQ15274 297 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 GPR68Q15743 365 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 TOMM34Q15785 309 aaPredicted RBP18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 DPY19L1Q2PZI1 675 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 ATAD3BQ5T9A4 648 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 FCRLAQ7L513 359 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 STEAP2Q8NFT2 490 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 RFWD2Q8NHY2 731 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 MIPOL1Q8TD10 442 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 ABHD3Q8WU67 409 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 TESCQ96BS2 214 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 C18orf12Q96KH6 178 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 PARD6BQ9BYG5 372 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 SRXN1Q9BYN0 137 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 ACTR6Q9GZN1 396 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 LAT2Q9GZY6 243 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 HAO1Q9UJM8 370 aa18.16■□□□□ 0.5
PDLIM4-206ENST00000474421 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 GUSBP08236 651 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 UQCRC2P22695 453 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 LOXP28300 417 aaPredicted RBP18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 RAC3P60763 192 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 NDUFAF6Q330K2 333 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 PRSS57Q6UWY2 283 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 C22orf34Q6ZV56 151 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 EIF3MQ7L2H7 374 aaKnown RBP18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 KRTAP1-3Q8IUG1 177 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 ATP6V1C2Q8NEY4 427 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 TMEM234Q8WY98 164 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 ST8SIA1Q92185 356 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 POM121Q96HA1 1249 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 HS3ST6Q96QI5 342 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 ZNF350Q9GZX5 532 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 CENPHQ9H3R5 247 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 SERHL2Q9H4I8 314 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 POLE3Q9NRF9 147 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 RAI1Q7Z5J4 1906 aaPredicted RBP18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 NAV3Q8IVL0 2385 aa18.15■□□□□ 0.5
PDLIM4-206ENST00000474421 KLF4O43474 513 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 CSTAP01040 98 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 YES1P07947 543 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 LBPP18428 481 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 STX3Q13277 289 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 SKP2Q13309 424 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 Q5PR19 223 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 CEP85LQ5SZL2 805 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 HEPHL1Q6MZM0 1159 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 C3orf33Q6P1S2 294 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 SORT1Q99523 831 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 USB1Q9BQ65 265 aaKnown RBP18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 C20orf27Q9GZN8 174 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 OR51I1Q9H343 314 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 GSX1Q9H4S2 264 aaPredicted RBP18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 COQ10BQ9H8M1 238 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 KCNK9Q9NPC2 374 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 SERINC1Q9NRX5 453 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 KLHL9Q9P2J3 617 aa18.14■□□□□ 0.49
PDLIM4-206ENST00000474421 FREM1Q5H8C1 2179 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 FAM171A2A8MVW0 826 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 FCMRO60667 390 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 DNAJA2O60884 412 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 CYP7B1O75881 506 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 INHBBP09529 407 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 PGCP20142 388 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 ADSLP30566 484 aaPredicted RBP18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 TIGD2Q4W5G0 525 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 TFAP2EQ6VUC0 442 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 PLEKHM3Q6ZWE6 761 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 TUSC5Q8IXB3 177 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 CLEC4FQ8N1N0 589 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 THUMPD3Q9BV44 507 aaKnown RBP18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 NUF2Q9BZD4 464 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 RAB21Q9UL25 225 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 MKLN1Q9UL63 735 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 SLC35A3Q9Y2D2 325 aa18.13■□□□□ 0.49
PDLIM4-206ENST00000474421 ESPNB1AK53 854 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 KIAA0513O60268 411 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 SCN2BO60939 215 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 TMCC2O75069 709 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 UGT2B17O75795 530 aa18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 CPSF4O95639 269 aaKnown RBP18.12■□□□□ 0.49
PDLIM4-206ENST00000474421 BGNP21810 368 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms