RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CENPVL1A0A0U1RR11 272 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 PRAMEF27A3QJZ7 478 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 SH3D21A4FU49 640 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 GJE1A6NN92 205 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 ETV2O00321 342 aaPredicted RBP10.02□□□□□ -0.81
CKS1B-206ENST00000474215 RFXANKO14593 260 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 KIAA0513O60268 411 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 CYP7B1O75881 506 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 TGDSO95455 350 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 PLGP00747 810 aaPredicted RBP10.02□□□□□ -0.81
CKS1B-206ENST00000474215 CSTAP01040 98 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 SHC1P29353 583 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 SFTPDP35247 375 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 CD79BP40259 229 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 CCR4P51679 360 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 TXNL4AP83876 142 aaKnown RBP10.02□□□□□ -0.81
CKS1B-206ENST00000474215 FAM27E3Q08E93 113 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 FUT5Q11128 374 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 CBFBQ13951 182 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 QPRTQ15274 297 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 TMEM176BQ3YBM2 270 aaPredicted RBP10.02□□□□□ -0.81
CKS1B-206ENST00000474215 GPAT3Q53EU6 434 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 TTMPQ5BVD1 217 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 GTF2IRD2BQ6EKJ0 949 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 ZNF474Q6S9Z5 364 aaPredicted RBP10.02□□□□□ -0.81
CKS1B-206ENST00000474215 GTF2IRD2Q86UP8 949 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 GOLGA6L1Q8N7Z2 621 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 ZNF610Q8N9Z0 462 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 NRGNQ92686 78 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 ZG16BQ96DA0 208 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 GMPPAQ96IJ6 420 aaPredicted RBP10.02□□□□□ -0.81
CKS1B-206ENST00000474215 DACH2Q96NX9 599 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 TRNT1Q96Q11 434 aaKnown RBP10.02□□□□□ -0.81
CKS1B-206ENST00000474215 VIPAS39Q9H9C1 493 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 PLSCR4Q9NRQ2 329 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 GLRX2Q9NS18 164 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 ELOVL5Q9NYP7 299 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 ZIM2Q9NZV7 527 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 EMC9Q9Y3B6 208 aa10.02□□□□□ -0.81
CKS1B-206ENST00000474215 NUP214P35658 2090 aaPredicted RBP10.02□□□□□ -0.81
CKS1B-206ENST00000474215 CSMD1Q96PZ7 3565 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 HMGB1P1B2RPK0 211 aaPredicted RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 CASKO14936 926 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 SS18L1O75177 396 aaPredicted RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 GOSR1O95249 250 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 H6PDO95479 791 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 KRT75O95678 551 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 PABPC4LP0CB38 370 aaKnown RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 UBTFL6P0CB48 400 aaPredicted RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ZCCHC18P0CG32 403 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 PGCP20142 388 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 DNAJA1P31689 397 aaKnown RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 CPOXP36551 454 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 PGM1P36871 562 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 MAGEA8P43361 318 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 KCNJ5P48544 419 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 IDH3AP50213 366 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 POLR2JP52435 117 aaKnown RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 CTBP2P56545 445 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 HPCAP84074 193 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 CHRNEQ04844 493 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 SYPL1Q16563 259 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 COX20Q5RI15 118 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 FBXW10Q5XX13 1052 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 FRRS1Q6ZNA5 592 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 MSANTD1Q6ZTZ1 278 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 CDC20BQ86Y33 519 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ZNF619Q8N2I2 560 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 MIER2Q8N344 545 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ANKFN1Q8N957 763 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ATP6V1C2Q8NEY4 427 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 OR6K3Q8NGY3 331 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 TMEM234Q8WY98 164 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ST8SIA1Q92185 356 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 PMM1Q92871 262 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 REXO5Q96IC2 774 aaKnown RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ITCHQ96J02 903 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 RMND5AQ9H871 391 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 MTHFD2LQ9H903 347 aaPredicted RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 SLCO1B3Q9NPD5 702 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 SLC6A13Q9NSD5 602 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ARGLU1Q9NWB6 273 aaPredicted RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 CLEC4AQ9UMR7 237 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 EDARQ9UNE0 448 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 PROCRQ9UNN8 238 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 SLC35A3Q9Y2D2 325 aa10.01□□□□□ -0.81
CKS1B-206ENST00000474215 ANKHD1Q8IWZ3 2542 aaKnown RBP10.01□□□□□ -0.81
CKS1B-206ENST00000474215 HRNRQ86YZ3 2850 aaPredicted RBP10□□□□□ -0.81
CKS1B-206ENST00000474215 FAM234BA2RU67 622 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 AGAP5A6NIR3 686 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 C16orf97H3BN30 126 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 ANP32DO95626 131 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 NR2F1P10589 423 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 NID1P14543 1247 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 POU2F1P14859 743 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 H2AFXP16104 143 aaPredicted RBP10□□□□□ -0.81
CKS1B-206ENST00000474215 SLC7A1P30825 629 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 UGT2B10P36537 528 aa10□□□□□ -0.81
CKS1B-206ENST00000474215 SESN3P58005 492 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms