RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ADAM19Q9H013 955 aa9.39□□□□□ -0.91
CASC3-204ENST00000474190 TSPAN10Q9H1Z9 355 aaPredicted RBP9.39□□□□□ -0.91
CASC3-204ENST00000474190 ACKR4Q9NPB9 350 aa9.39□□□□□ -0.91
CASC3-204ENST00000474190 PPP4R1LQ9P1A2 415 aa9.39□□□□□ -0.91
CASC3-204ENST00000474190 SPRR3Q9UBC9 169 aa9.39□□□□□ -0.91
CASC3-204ENST00000474190 SLC35A3Q9Y2D2 325 aa9.39□□□□□ -0.91
CASC3-204ENST00000474190 MRPS18CQ9Y3D5 142 aaKnown RBP9.39□□□□□ -0.91
CASC3-204ENST00000474190 GMFGO60234 142 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 ZNF24P17028 368 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 MSX1P28360 303 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 SHC1P29353 583 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 SRD5A2P31213 254 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 SUMO3P55854 103 aaPredicted RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 DSCR4P56555 118 aaPredicted RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 HSF1Q00613 529 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 BNIP2Q12982 314 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 ZSCAN26Q16670 478 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 LRRC23Q53EV4 343 aaPredicted RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 INTS11Q5TA45 600 aaKnown RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 CYP2R1Q6VVX0 501 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 YRDCQ86U90 279 aaKnown RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 GTPBP8Q8N3Z3 284 aaPredicted RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 FAM109AQ8N4B1 249 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 OR5M1Q8NGP8 315 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 NR4A3Q92570 626 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 SLCO4A1Q96BD0 722 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 CCDC124Q96CT7 223 aaKnown RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 HSH2DQ96JZ2 352 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 JSRP1Q96MG2 331 aaPredicted RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 DEFB127Q9H1M4 99 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 SLC6A15Q9H2J7 730 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 QPCTLQ9NXS2 382 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 SEC14L3Q9UDX4 400 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 MAGEL2Q9UJ55 1249 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 ANAPC2Q9UJX6 822 aa9.38□□□□□ -0.91
CASC3-204ENST00000474190 BOKQ9UMX3 212 aaPredicted RBP9.38□□□□□ -0.91
CASC3-204ENST00000474190 NINQ8N4C6 2090 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 TCRBV3S1A0A5B6 114 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 OR2M5A3KFT3 312 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 TMEM247A6NEH6 219 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 CFAP73A6NFT4 308 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 B8ZZF3 427 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 H0YC42 278 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 CDC40O60508 579 aaKnown RBP eCLIP9.37□□□□□ -0.91
CASC3-204ENST00000474190 SERPINB7O75635 380 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 PDE9AO76083 593 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 PRKD3O94806 890 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 HPGDP15428 266 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 DPP4P27487 766 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 OR1E2P47887 323 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 TPD52P55327 224 aaPredicted RBP9.37□□□□□ -0.91
CASC3-204ENST00000474190 SESN3P58005 492 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 VLDLRP98155 873 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 TRAP1Q12931 704 aaKnown RBP9.37□□□□□ -0.91
CASC3-204ENST00000474190 FOXF1Q12946 379 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 CCNIQ14094 377 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 LARS2Q15031 903 aaKnown RBP9.37□□□□□ -0.91
CASC3-204ENST00000474190 QPRTQ15274 297 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 NHSL2Q5HYW2 709 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 EMC4Q5J8M3 183 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 WIPI1Q5MNZ9 446 aaPredicted RBP9.37□□□□□ -0.91
CASC3-204ENST00000474190 LINC00114Q6XXX2 140 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 WDR88Q6ZMY6 472 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 SLC22A16Q86VW1 577 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 ADGRG3Q86Y34 549 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 KRT73Q86Y46 540 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 ADGRG5Q8IZF4 528 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 LSMEM1Q8N8F7 131 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 C3orf49Q96BT1 292 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 GPR137Q96N19 417 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 SPATA5L1Q9BVQ7 753 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 AMBRA1Q9C0C7 1298 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 SDHAF3Q9NRP4 125 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 MAN2C1Q9NTJ4 1040 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 ACER3Q9NUN7 267 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 TNFRSF10DQ9UBN6 386 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 ACAD8Q9UKU7 415 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 SLC6A5Q9Y345 797 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 FLNCQ14315 2725 aa9.37□□□□□ -0.91
CASC3-204ENST00000474190 PCNX3Q9H6A9 2034 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 MYO9AB2RTY4 2548 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 SHANK1Q9Y566 2161 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 EML6Q6ZMW3 1958 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 IGKV1D-42A0A075B6H8 117 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 A0A0B4J2E0 115 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 A0A1B0GX12 115 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 KDM4EB2RXH2 506 aaPredicted RBP9.36□□□□□ -0.91
CASC3-204ENST00000474190 ANKRD65E5RJM6 399 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 NPIPA5E9PKD4 350 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 H3BNH8 94 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 J3KTA2 159 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 GTPBP1O00178 669 aaKnown RBP9.36□□□□□ -0.91
CASC3-204ENST00000474190 NPIPB7O75200 414 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 GDF1P27539 372 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 RYKP34925 604 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 MAGEA2P43356 314 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 MASP1P48740 699 aa9.36□□□□□ -0.91
CASC3-204ENST00000474190 CLK3P49761 638 aaKnown RBP9.36□□□□□ -0.91
CASC3-204ENST00000474190 LHX2P50458 406 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms