RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SDR39U1Q9NRG7 319 aaPredicted RBP20.21■□□□□ 0.83
PTP4A1-203ENST00000473334 HRNRQ86YZ3 2850 aaPredicted RBP20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 GJE1A6NN92 205 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 HMGN4O00479 90 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 RFXANKO14593 260 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 EFNA2O43921 213 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 NTN1O95631 604 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 CGAP01215 116 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 C1QCP02747 245 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 GSNP06396 782 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 SHC1P29353 583 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 QPRTQ15274 297 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 MAPK14Q16539 360 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 GPAT3Q53EU6 434 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 EIF3MQ7L2H7 374 aaKnown RBP20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 HDXQ7Z353 690 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 OSTF1Q92882 214 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 GMPPAQ96IJ6 420 aaPredicted RBP20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 DACH2Q96NX9 599 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 ARGLU1Q9NWB6 273 aaPredicted RBP20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 PROCRQ9UNN8 238 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 SLC35A3Q9Y2D2 325 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 EMC9Q9Y3B6 208 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 CCDC168Q8NDH2 2452 aa20.2■□□□□ 0.82
PTP4A1-203ENST00000473334 PRAMEF27A3QJZ7 478 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 SH3D21A4FU49 640 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 ETV2O00321 342 aaPredicted RBP20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 DNAJA2O60884 412 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 GOSR1O95249 250 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 PLGP00747 810 aaPredicted RBP20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 UBTFL6P0CB48 400 aaPredicted RBP20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 CD79BP40259 229 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 CARD18P57730 90 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 SELENBP1Q13228 472 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 ZNF474Q6S9Z5 364 aaPredicted RBP20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 EPGNQ6UW88 154 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 GOLGA6L1Q8N7Z2 621 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 NRGNQ92686 78 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 ZNF524Q96C55 264 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 THUMPD3Q9BV44 507 aaKnown RBP20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 TIGARQ9NQ88 270 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 GLRX2Q9NS18 164 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 CLEC4AQ9UMR7 237 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 LIPT1Q9Y234 373 aa20.19■□□□□ 0.82
PTP4A1-203ENST00000473334 UQCRHLA0A096LP55 91 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 SS18L1O75177 396 aaPredicted RBP20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 TGDSO95455 350 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 H6PDO95479 791 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 KRT75O95678 551 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 PGCP20142 388 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 PGM1P36871 562 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 CTBP2P56545 445 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 FAM27E3Q08E93 113 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 ZNF239Q16600 458 aaKnown RBP20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 FBXW10Q5XX13 1052 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 DNAJC14Q6Y2X3 702 aaPredicted RBP20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 MSANTD1Q6ZTZ1 278 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 MIER2Q8N344 545 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 ZNF610Q8N9Z0 462 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 FAM71CQ8NEG0 241 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 OR6K3Q8NGY3 331 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 ZFP90Q8TF47 636 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 DYDC1Q8WWB3 177 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 ST8SIA1Q92185 356 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 CPNE4Q96A23 557 aaPredicted RBP20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 TRNT1Q96Q11 434 aaKnown RBP20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 SLC39A3Q9BRY0 314 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 RMND5AQ9H871 391 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 VIPAS39Q9H9C1 493 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 SLCO1B3Q9NPD5 702 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 ELOVL5Q9NYP7 299 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 NDRG3Q9UGV2 375 aa20.18■□□□□ 0.82
PTP4A1-203ENST00000473334 SPG11Q96JI7 2443 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 HMGB1P1B2RPK0 211 aaPredicted RBP20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 POLR3GO15318 223 aaPredicted RBP20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 POU2F1P14859 743 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 DNAJA1P31689 397 aaKnown RBP20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 POLR2JP52435 117 aaKnown RBP20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 CHRNEQ04844 493 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 SYPL1Q16563 259 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 TMEM176BQ3YBM2 270 aaPredicted RBP20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 COX20Q5RI15 118 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 GTF2IRD2BQ6EKJ0 949 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 GTF2IRD2Q86UP8 949 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 CDC20BQ86Y33 519 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 ATP6V1C2Q8NEY4 427 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 OR9I1Q8NGQ6 314 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 PNPT1Q8TCS8 783 aaKnown RBP20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 TMEM234Q8WY98 164 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 ZG16BQ96DA0 208 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 TESMINQ9Y4I5 508 aa20.17■□□□□ 0.82
PTP4A1-203ENST00000473334 ANP32DO95626 131 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 CHRM4P08173 479 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 PABPC4LP0CB38 370 aaKnown RBP20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 ZCCHC18P0CG32 403 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 NID1P14543 1247 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 H2AFXP16104 143 aaPredicted RBP20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 MAGEA8P43361 318 aa20.16■□□□□ 0.82
PTP4A1-203ENST00000473334 KCNJ5P48544 419 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms