RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 HS6ST2Q96MM7 605 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 GPR137Q96N19 417 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 CACYBPQ9HB71 228 aaKnown RBP19.57■□□□□ 0.72
COL18A1-207ENST00000473212 B3GNT2Q9NY97 397 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 ZMIZ1Q9ULJ6 1067 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 ARHGEF17Q96PE2 2063 aaPredicted RBP19.57■□□□□ 0.72
COL18A1-207ENST00000473212 TRIOO75962 3097 aa19.57■□□□□ 0.72
COL18A1-207ENST00000473212 A0A1W2PQU0 124 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 MAGEB4O15481 346 aaPredicted RBP19.56■□□□□ 0.72
COL18A1-207ENST00000473212 PLPP2O43688 288 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 SYPP08247 313 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 CXCL3P19876 107 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 SHC2P98077 582 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 SMUG1Q53HV7 270 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 ZNF782Q6ZMW2 699 aaPredicted RBP19.56■□□□□ 0.72
COL18A1-207ENST00000473212 PRSS41Q7RTY9 318 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 MFSD9Q8NBP5 474 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 TOR1AIP2Q8NFQ8 470 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 OR11H4Q8NGC9 324 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 OR13C5Q8NGS8 318 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 OR14C36Q8NHC7 312 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 FN3KQ9H479 309 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 DIABLOQ9NR28 239 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 MAT2BQ9NZL9 334 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 ZNF223Q9UK11 482 aaPredicted RBP19.56■□□□□ 0.72
COL18A1-207ENST00000473212 LOC105369274A0A096LPK9 316 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 TCRBP04435 133 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 GYPBP06028 91 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 MTSS1LQ765P7 747 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 OR4N4Q8N0Y3 316 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 CYB561A3Q8NBI2 242 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 SRFBP1Q8NEF9 429 aaKnown RBP19.56■□□□□ 0.72
COL18A1-207ENST00000473212 MS4A4EQ96PG1 132 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 TEAD3Q99594 435 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 IFT27Q9BW83 186 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 OR51J1Q9H342 316 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 ADAP2Q9NPF8 381 aa19.56■□□□□ 0.72
COL18A1-207ENST00000473212 MRPS7Q9Y2R9 242 aaKnown RBP19.56■□□□□ 0.72
COL18A1-207ENST00000473212 TEX13CA0A0J9YWL9 993 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 PRR23D1E9PI22 279 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 LDB3O75112 727 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 PRR23D2P0DMB1 279 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 IL9P15248 144 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 FCARP24071 287 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 GIFP27352 417 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 HOXD11P31277 338 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 OR12D2P58182 307 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 EEF1A1P68104 462 aaKnown RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 RUNX2Q13950 521 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 SYT9Q86SS6 491 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 SP7Q8TDD2 431 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 CCDC86Q9H6F5 360 aaKnown RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 CAPN10Q9HC96 672 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 EMC7Q9NPA0 242 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 MRPS2Q9Y399 296 aaKnown RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 A0A0B4J203 849 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 TRAPPC13A5PLN9 417 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 PRR19A6NJB7 356 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 H0Y8X5 98 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 RNGTTO60942 597 aaKnown RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 FOXK2Q01167 660 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 TEX261Q6UWH6 196 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 RANBP3LQ86VV4 465 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 TPRA1Q86W33 373 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 SIAH3Q8IW03 269 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 LRRC25Q8N386 305 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 LNX2Q8N448 690 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 TOMM5Q8N4H5 51 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 RFLNBQ8N5W9 214 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 OR13C2Q8NGS9 318 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 TMEM239Q8WW34 195 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 ZFP3Q96NJ6 502 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 SDF2Q99470 211 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 RANBP3Q9H6Z4 567 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 CLDND1Q9NY35 253 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 DPP7Q9UHL4 492 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 ELF5Q9UKW6 265 aaPredicted RBP19.55■□□□□ 0.72
COL18A1-207ENST00000473212 U3KQ87 197 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 GON4LQ3T8J9 2241 aa19.55■□□□□ 0.72
COL18A1-207ENST00000473212 SPTBP11277 2137 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 TRAV27A0A087WT01 109 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 A0A1W2PPK0 400 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 POM121BA6NF01 834 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 GRXCR1A8MXD5 290 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 ANXA3P12429 323 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 ACSM3Q53FZ2 586 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 FIGNL1Q6PIW4 674 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 LCN9Q8WX39 176 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 MAP6Q96JE9 813 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 TIMM29Q9BSF4 260 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 RAB11FIP5Q9BXF6 653 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 RSPH9Q9H1X1 276 aaPredicted RBP19.54■□□□□ 0.72
COL18A1-207ENST00000473212 NUBP2Q9Y5Y2 271 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 FAM86C2PA6NEL3 165 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 CTSVO60911 334 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 SLC22A5O76082 557 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 CMPK1P30085 196 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 CCR6P51684 374 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 HCCSP53701 268 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 DGCR2P98153 550 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms