RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 SLC9B1Q4ZJI4 515 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 ARMCX4Q5H9R4 360 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 ZNF362Q5T0B9 420 aaPredicted RBP8.86□□□□□ -0.99
CDHR3-209ENST00000472116 TTC19Q6DKK2 380 aaPredicted RBP8.86□□□□□ -0.99
CDHR3-209ENST00000472116 SYT10Q6XYQ8 523 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 ZC3HC1Q86WB0 502 aaKnown RBP8.86□□□□□ -0.99
CDHR3-209ENST00000472116 MISPQ8IVT2 679 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 WDR31Q8NA23 367 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 OR4F15Q8NGB8 312 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 OR4F5Q8NH21 305 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 B4GALNT2Q8NHY0 566 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 POC1BQ8TC44 478 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 CFAP36Q96G28 342 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 ZNF681Q96N22 645 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 KATNB1Q9BVA0 655 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 MRPL1Q9BYD6 325 aaKnown RBP8.86□□□□□ -0.99
CDHR3-209ENST00000472116 COQ10BQ9H8M1 238 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 MALT1Q9UDY8 824 aa8.86□□□□□ -0.99
CDHR3-209ENST00000472116 ALG1L2C9J202 215 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 CLDN34H7C241 214 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 GPR171O14626 319 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 ZNF195O14628 629 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 PIP5K1BO14986 540 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 FGGP02679 453 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 ADRA2AP08913 450 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 CD1DP15813 335 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 PAX7P23759 505 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 MPIP34949 423 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 TMEM33P57088 247 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 LOXL3P58215 753 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 ILF2Q12905 390 aaKnown RBP8.85□□□□□ -0.99
CDHR3-209ENST00000472116 SELENBP1Q13228 472 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 C9orf135Q5VTT2 229 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 CAVIN1Q6NZI2 390 aaKnown RBP8.85□□□□□ -0.99
CDHR3-209ENST00000472116 APOOLQ6UXV4 268 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 PPIL6Q8IXY8 311 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 MMGT1Q8N4V1 131 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 KIR3DL3Q8N743 410 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 CEP70Q8NHQ1 597 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 STAG3L4Q8TBR4 150 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 WDR20Q8TBZ3 569 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 UBTD2Q8WUN7 234 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 CKAP2Q8WWK9 683 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 RDH5Q92781 318 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 EXOSC8Q96B26 276 aaKnown RBP8.85□□□□□ -0.99
CDHR3-209ENST00000472116 SLC38A2Q96QD8 506 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 CITED1Q99966 193 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 ZNF416Q9BWM5 594 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 RSPO3Q9BXY4 272 aaPredicted RBP8.85□□□□□ -0.99
CDHR3-209ENST00000472116 TPK1Q9H3S4 243 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 PLAC1Q9HBJ0 212 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 OXSMQ9NWU1 459 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 DCTN4Q9UJW0 460 aa8.85□□□□□ -0.99
CDHR3-209ENST00000472116 A0A1W2PNR3 127 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 SCDO00767 359 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 PLPP2O43688 288 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 SLITRK5O94991 958 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 ITGA5P08648 1049 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 PIK3CGP48736 1102 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 IFT88Q13099 833 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 DOC2BQ14184 412 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 SLC29A2Q14542 456 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 TAF9Q16594 264 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 BEAN1Q3B7T3 259 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 OLFML2AQ68BL7 652 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 COMMD6Q7Z4G1 85 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 GSPT2Q8IYD1 628 aaKnown RBP8.84□□□□□ -0.99
CDHR3-209ENST00000472116 METTL4Q8N3J2 472 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 NAT8LQ8N9F0 302 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 OR7G2Q8NG99 324 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 FBXO27Q8NI29 283 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 FAM110DQ8TAY7 271 aaPredicted RBP8.84□□□□□ -0.99
CDHR3-209ENST00000472116 GTF3AQ92664 365 aaKnown RBP8.84□□□□□ -0.99
CDHR3-209ENST00000472116 DVL3Q92997 716 aaPredicted RBP8.84□□□□□ -0.99
CDHR3-209ENST00000472116 ATP6V1E2Q96A05 226 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 TM4SF18Q96CE8 201 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 ZHX1-C8orf76Q96EF9 292 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 DOK1Q99704 481 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 RACGAP1Q9H0H5 632 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 KCNF1Q9H3M0 494 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 MS4A5Q9H3V2 200 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 ZNF442Q9H7R0 627 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 ZNF665Q9H7R5 613 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 OBP2BQ9NPH6 170 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 DDX18Q9NVP1 670 aaKnown RBP8.84□□□□□ -0.99
CDHR3-209ENST00000472116 NSMCE4AQ9NXX6 385 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 NUP50Q9UKX7 468 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 NFU1Q9UMS0 254 aa8.84□□□□□ -0.99
CDHR3-209ENST00000472116 GPC6Q9Y625 555 aaPredicted RBP8.84□□□□□ -0.99
CDHR3-209ENST00000472116 TET2Q6N021 2002 aaPredicted RBP8.83□□□□□ -1
CDHR3-209ENST00000472116 IGHV1-18A0A0C4DH31 117 aa8.83□□□□□ -1
CDHR3-209ENST00000472116 LOC100653049A0A140TA62 436 aa8.83□□□□□ -1
CDHR3-209ENST00000472116 TTC36A6NLP5 189 aa8.83□□□□□ -1
CDHR3-209ENST00000472116 M0R233 179 aa8.83□□□□□ -1
CDHR3-209ENST00000472116 SHOX2O60902 331 aaPredicted RBP8.83□□□□□ -1
CDHR3-209ENST00000472116 KRT34O76011 436 aa8.83□□□□□ -1
CDHR3-209ENST00000472116 OXSR1O95747 527 aaPredicted RBP8.83□□□□□ -1
CDHR3-209ENST00000472116 PRB2P02812 416 aaPredicted RBP8.83□□□□□ -1
CDHR3-209ENST00000472116 LINGO3P0C6S8 592 aa8.83□□□□□ -1
CDHR3-209ENST00000472116 GABRA3P34903 492 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms