RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 NRMQ8IXM6 262 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 EFCAB13Q8IY85 973 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 LINC01561Q8N1V8 128 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 RNF182Q8N6D2 247 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 STKLD1Q8NE28 680 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ANKRD20A12PQ8NF67 263 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 OR52E1Q8NGJ3 308 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 URGCPQ8TCY9 931 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 DQX1Q8TE96 717 aaKnown RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 DEDD2Q8WXF8 326 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 KRT35Q92764 455 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ATP6V0A1Q93050 837 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 SNX21Q969T3 373 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ATP6V1E2Q96A05 226 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 CELF6Q96J87 481 aaKnown RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 RASL11BQ9BPW5 248 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 KLHDC3Q9BQ90 382 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 CRNKL1Q9BZJ0 848 aaKnown RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 TMEM231Q9H6L2 316 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 RPAP3Q9H6T3 665 aaPredicted RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 SLC25A22Q9H936 323 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 PLGRKTQ9HBL7 147 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 MID1IP1Q9NPA3 183 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 RBAKQ9NYW8 714 aaPredicted RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 NUFIP1Q9UHK0 495 aaKnown RBP0.75□□□□□ -2.29
UBXN4-207ENST00000471246 APPL1Q9UKG1 709 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ANGPTL2Q9UKU9 493 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 DNPEPQ9ULA0 475 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 PLA2G4CQ9UP65 541 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF835Q9Y2P0 537 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 DOCK8Q8NF50 2099 aa0.75□□□□□ -2.29
UBXN4-207ENST00000471246 CCDC7Q96M83 1385 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 MAP3K15Q6ZN16 1313 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 A0A1B0GWB2 263 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 TMEM150BA6NC51 233 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 HELTA6NFD8 242 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 ARHGAP42A6NI28 874 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 OR6C65A6NJZ3 312 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 FAM74A7A6NL05 159 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 C11orf94C9JXX5 98 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 H3BMQ9 156 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 GFYI3L273 518 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 LGALS8O00214 317 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 FCN1O00602 326 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 HCRTR1O43613 425 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 PNPP00491 289 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 IGLV3-19P01714 112 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF286BP0CG31 522 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 CRISP2P16562 243 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 IGFBP3P17936 291 aaPredicted RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 OTX2P32243 289 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 HSPA1LP34931 641 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 TFPI2P48307 235 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 OSTNP61366 133 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 CHRNB3Q05901 458 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 LAGE3Q14657 143 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 NDUFA9Q16795 377 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 CCDC57Q2TAC2 916 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 C2orf76Q3KRA6 126 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 TIGITQ495A1 244 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 FAM74A3Q4VXF1 159 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 GPR157Q5UAW9 335 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 C1orf146Q5VVC0 180 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 FAM199XQ6PEV8 388 aaPredicted RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 C6orf89Q6UWU4 347 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 UNC5DQ6UXZ4 953 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 WDR88Q6ZMY6 472 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 TMEM26Q6ZUK4 368 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 LANCL3Q6ZV70 420 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 TAF8Q7Z7C8 310 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 PNKDQ8N490 385 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF615Q8N8J6 731 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 NKAPP1Q8N9T2 125 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 CCNYQ8ND76 341 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 OR10G2Q8NGC3 310 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 OR2L8Q8NGY9 312 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 CNIH3Q8TBE1 160 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 PAQR8Q8TEZ7 354 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 PHF10Q8WUB8 498 aaKnown RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 CHCHD10Q8WYQ3 142 aaPredicted RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 STARD8Q92502 1023 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 NCLNQ969V3 563 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 MS4A14Q96JA4 679 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 CABS1Q96KC9 395 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 ZNF578Q96N58 590 aaPredicted RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 OR5B2Q96R09 309 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 KCNA7Q96RP8 456 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 CITED1Q99966 193 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 NRIP2Q9BQI9 281 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 PELOQ9BRX2 385 aaKnown RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 DUSP16Q9BY84 665 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 ING2Q9H160 280 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 EML4Q9HC35 981 aaKnown RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 POLD4Q9HCU8 107 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 AIG1Q9NVV5 245 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 B3GNT2Q9NY97 397 aa0.74□□□□□ -2.29
UBXN4-207ENST00000471246 WRAP73Q9P2S5 460 aaPredicted RBP0.74□□□□□ -2.29
UBXN4-207ENST00000471246 KCNN3Q9UGI6 736 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms