RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 PAQR5Q9NXK6 330 aaPredicted RBP12.71□□□□□ -0.37
TOP3B-215ENST00000470338 CCDC167Q9P0B6 97 aa12.71□□□□□ -0.37
TOP3B-215ENST00000470338 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.37
TOP3B-215ENST00000470338 A0A096LPI6 279 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 A0A0J9YW62 118 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 A0A1W2PNV4 684 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 AGAP5A6NIR3 686 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 BCAS1O75363 584 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 OPN1LWP04000 364 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 TFPTP0C1Z6 253 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 UBTFL6P0CB48 400 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 NR2F1P10589 423 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 ETFAP13804 333 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 RPS4Y1P22090 263 aaKnown RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 ME2P23368 584 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 PEX19P40855 299 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 CRATP43155 626 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 EIF1AXP47813 144 aaKnown RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 PLAURQ03405 335 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 PON3Q15166 354 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 QPRTQ15274 297 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 SGCBQ16585 318 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 AGKQ53H12 422 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 LRIF1Q5T3J3 769 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 ARFGAP2Q8N6H7 521 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 TMCO5AQ8N6Q1 288 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 OR10D3Q8NH80 312 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 FNDC9Q8TBE3 224 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 AURKBQ96GD4 344 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 QRSL1Q9H0R6 528 aaKnown RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 PIGMQ9H3S5 423 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 RABEP2Q9H5N1 569 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 ZNF385DQ9H6B1 395 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 NPHS2Q9NP85 383 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 EXOSC3Q9NQT5 275 aaKnown RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 THUMPD1Q9NXG2 353 aaKnown RBP12.7□□□□□ -0.38
TOP3B-215ENST00000470338 KCNN3Q9UGI6 736 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 DCTN4Q9UJW0 460 aa12.7□□□□□ -0.38
TOP3B-215ENST00000470338 CLIC1O00299 241 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 NR5A2O00482 541 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 CYP7B1O75881 506 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 AQP8O94778 261 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 CD1EP15812 388 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 NCF2P19878 526 aaPredicted RBP12.69□□□□□ -0.38
TOP3B-215ENST00000470338 PGCP20142 388 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 CAPN3P20807 821 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 SHC1P29353 583 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 UQCRC1P31930 480 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 KIR2DL2P43627 348 aaPredicted RBP12.69□□□□□ -0.38
TOP3B-215ENST00000470338 CCR4P51679 360 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 DSTNP60981 165 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 GUSBP1Q15486 140 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 RGNQ15493 299 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 PAGE3Q5JUK9 113 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 PDSS1Q5T2R2 415 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 METTL21CQ5VZV1 264 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 HMGN2P46Q86SG4 172 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 MSRB3Q8IXL7 192 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 CMIPQ8IY22 773 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 OR2V1Q8NHB1 315 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 SLC38A5Q8WUX1 472 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 ST8SIA1Q92185 356 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 STARD4Q96DR4 205 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 KLHL15Q96M94 604 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 RAD21L1Q9H4I0 556 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 TMEM185BQ9H7F4 350 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 MED4Q9NPJ6 270 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 SLC25A37Q9NYZ2 338 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 CALML5Q9NZT1 146 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 SLAMF8Q9P0V8 285 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 P2RX2Q9UBL9 471 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 TRIM33Q9UPN9 1127 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 GMEB1Q9Y692 573 aa12.69□□□□□ -0.38
TOP3B-215ENST00000470338 DSPPQ9NZW4 1301 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 TRBV5-3A0A0A0MS03 114 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 A0A1W2PP18 115 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 CLDN24A6NM45 220 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 GJE1A6NN92 205 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 A8MXE2 369 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 EEF1E1-BLOC1S5C9J1V9 151 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 TNFSF11O14788 317 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 EEF1E1O43324 174 aaKnown RBP12.68□□□□□ -0.38
TOP3B-215ENST00000470338 CXCL13O43927 109 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 DBIP07108 87 aaKnown RBP12.68□□□□□ -0.38
TOP3B-215ENST00000470338 FCGR2AP12318 317 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 BMP2P12643 396 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 NID1P14543 1247 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 SLC6A8P48029 635 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 CARD18P57730 90 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 SESN3P58005 492 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 FADDQ13158 208 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 HSP90B2PQ58FF3 399 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 HBMQ6B0K9 141 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 TMEM234Q8WY98 164 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 CNOT9Q92600 299 aaKnown RBP12.68□□□□□ -0.38
TOP3B-215ENST00000470338 OSTF1Q92882 214 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 MCCC2Q9HCC0 563 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 ACER3Q9NUN7 267 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms