RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ELK4P28324 431 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 PCSK6P29122 969 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 SOAT1P35610 550 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 SERPINB5P36952 375 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 CASP9P55211 416 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 CLDN8P56748 225 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 VSNL1P62760 191 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 EMX2Q04743 252 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF844Q08AG5 666 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 QPRTQ15274 297 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 PDZK1Q5T2W1 519 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 TFAP2EQ6VUC0 442 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 CLECL1Q8IZS7 167 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF619Q8N2I2 560 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 TOR1AIP2Q8NFQ8 470 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 MOAP1Q96BY2 351 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 TACO1Q9BSH4 297 aaKnown RBP11.81□□□□□ -0.52
CPSF4-210ENST00000469897 THUMPD3Q9BV44 507 aaKnown RBP11.81□□□□□ -0.52
CPSF4-210ENST00000469897 QRSL1Q9H0R6 528 aaKnown RBP11.81□□□□□ -0.52
CPSF4-210ENST00000469897 KCNE5Q9UJ90 142 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 LAMP3Q9UQV4 416 aa11.81□□□□□ -0.52
CPSF4-210ENST00000469897 SERINC4A6NH21 518 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 CLOCKO15516 846 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 UBL4AP11441 157 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 IL32P24001 234 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 CCR4P51679 360 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 SUMO3P55854 103 aaPredicted RBP11.8□□□□□ -0.52
CPSF4-210ENST00000469897 RAC3P60763 192 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 CBFBQ13951 182 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 CAPRIN1Q14444 709 aaKnown RBP11.8□□□□□ -0.52
CPSF4-210ENST00000469897 TAB1Q15750 504 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 OR4F3Q6IEY1 312 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 BHLHB9Q6PI77 547 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 NUDCD3Q8IVD9 361 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 SLC43A2Q8N370 569 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 TMCO5AQ8N6Q1 288 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 SFXN5Q8TD22 340 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 ZFP90Q8TF47 636 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 HSD17B8Q92506 261 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 MRGPRX4Q96LA9 322 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 SERHL2Q9H4I8 314 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 CXorf56Q9H5V9 222 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 COQ10BQ9H8M1 238 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF701Q9NV72 531 aaPredicted RBP11.8□□□□□ -0.52
CPSF4-210ENST00000469897 ING1Q9UK53 422 aaPredicted RBP11.8□□□□□ -0.52
CPSF4-210ENST00000469897 MKLN1Q9UL63 735 aa11.8□□□□□ -0.52
CPSF4-210ENST00000469897 DUXAA6NLW8 204 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 TYROBPO43914 113 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 STX11O75558 287 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 UGT2B17O75795 530 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 PAX1P15863 534 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 SLC7A1P30825 629 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 ETV4P43268 484 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 ATP5J2P56134 94 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 MAD2L1Q13257 205 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-210ENST00000469897 ITGADQ13349 1161 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 P2RY6Q15077 328 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF141Q15928 474 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 TIGD2Q4W5G0 525 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 NCMAPQ5T1S8 102 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.79□□□□□ -0.52
CPSF4-210ENST00000469897 ATG4DQ86TL0 474 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-210ENST00000469897 NEUROG1Q92886 237 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 KISS1RQ969F8 398 aaPredicted RBP11.79□□□□□ -0.52
CPSF4-210ENST00000469897 PKNOX2Q96KN3 472 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 OR5B2Q96R09 309 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 LAT2Q9GZY6 243 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 AKTIPQ9H8T0 292 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 GP6Q9HCN6 339 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 PRSS50Q9UI38 385 aa11.79□□□□□ -0.52
CPSF4-210ENST00000469897 CENPVL1A0A0U1RR11 272 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 H6PDO95479 791 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 CPSF4O95639 269 aaKnown RBP11.78□□□□□ -0.52
CPSF4-210ENST00000469897 CSTAP01040 98 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 CD3EP07766 207 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 OR12D1P0DN82 309 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 EDNRAP25101 427 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 SESN3P58005 492 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 C21orf58P58505 322 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 RASGEF1BQ0VAM2 473 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 MERTKQ12866 999 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 SELENBP1Q13228 472 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-210ENST00000469897 ARHGAP11BQ3KRB8 267 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 ADAM5Q6NVV9 412 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 PRIMA1Q86XR5 153 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF781Q8N8C0 355 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 OR4A15Q8NGL6 344 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 SMAP2Q8WU79 429 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-210ENST00000469897 XAGE5Q8WWM1 108 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 ZNF75CPQ92670 426 aaPredicted RBP11.78□□□□□ -0.52
CPSF4-210ENST00000469897 RAB8BQ92930 207 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 PSD2Q9BQI7 771 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 C20orf27Q9GZN8 174 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 NMUR2Q9GZQ4 415 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 OR51I1Q9H343 314 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
CPSF4-210ENST00000469897 BCO1Q9HAY6 547 aa11.78□□□□□ -0.52
CPSF4-210ENST00000469897 NGBQ9NPG2 151 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms