RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ZFP90Q8TF47 636 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 ROBO4Q8WZ75 1007 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 DPY30Q9C005 99 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 OR10A4Q9H209 315 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 MEAF6Q9HAF1 191 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 GP6Q9HCN6 339 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 KLHL13Q9P2N7 655 aa14.54□□□□□ -0.08
COL9A3-208ENST00000469802 PRSS51A0A1B0GVH4 220 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 GTPBP1O00178 669 aaKnown RBP14.53□□□□□ -0.08
COL9A3-208ENST00000469802 KLF4O43474 513 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 KIAA0513O60268 411 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 STX11O75558 287 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 UGT2B17O75795 530 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 PABPC4LP0CB38 370 aaKnown RBP14.53□□□□□ -0.08
COL9A3-208ENST00000469802 PSMB1P20618 241 aaKnown RBP14.53□□□□□ -0.08
COL9A3-208ENST00000469802 FUT5Q11128 374 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 CASP8Q14790 479 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 QPRTQ15274 297 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 RNPS1Q15287 305 aaKnown RBP14.53□□□□□ -0.08
COL9A3-208ENST00000469802 ACKR1Q16570 336 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 DPY19L1Q2PZI1 675 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 CEP85LQ5SZL2 805 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 SAXO2Q658L1 398 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 ANKRD34AQ69YU3 496 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 GTF2IRD2BQ6EKJ0 949 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 TFAP2EQ6VUC0 442 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 BEND4Q6ZU67 534 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 OLIG3Q7RTU3 272 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 GTF2IRD2Q86UP8 949 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 ANKRD46Q86W74 232 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 LRRC75A-AS1Q8N1F1 130 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 FAM71CQ8NEG0 241 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 OR4A15Q8NGL6 344 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 OIT3Q8WWZ8 545 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 IGFBPL1Q8WX77 278 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 POM121Q96HA1 1249 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 NUF2Q9BZD4 464 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 LAT2Q9GZY6 243 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 OR51I1Q9H343 314 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 TIGARQ9NQ88 270 aa14.53□□□□□ -0.08
COL9A3-208ENST00000469802 UQCRHLA0A096LP55 91 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-208ENST00000469802 GCM2O75603 506 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-208ENST00000469802 LBPP18428 481 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 UQCRC2P22695 453 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 NKX6-1P78426 367 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-208ENST00000469802 BST1Q10588 318 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 CBFBQ13951 182 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 GPR68Q15743 365 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 TMEM176BQ3YBM2 270 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-208ENST00000469802 BEX5Q5H9J7 111 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 SPANXN4Q5MJ08 99 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 SHEQ5VZ18 495 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 C20orf204Q6ZNR8 217 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 FCRLAQ7L513 359 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 STK32CQ86UX6 486 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 GABRG1Q8N1C3 465 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 TMCO5AQ8N6Q1 288 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 ST8SIA1Q92185 356 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 PIGTQ969N2 578 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 NEURL3Q96EH8 262 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 ACTR6Q9GZN1 396 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 SAP130Q9H0E3 1048 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 C12orf49Q9H741 205 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 UBTD1Q9HAC8 227 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 FANCFQ9NPI8 374 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 POLE3Q9NRF9 147 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 EXD2Q9NVH0 621 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 ING1Q9UK53 422 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-208ENST00000469802 MKLN1Q9UL63 735 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 GPR52Q9Y2T5 361 aa14.52□□□□□ -0.09
COL9A3-208ENST00000469802 NAV3Q8IVL0 2385 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 E9PBE3 544 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 H6PDO95479 791 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 AGR2O95994 175 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 ALDOCP09972 364 aaKnown RBP14.51□□□□□ -0.09
COL9A3-208ENST00000469802 FPR1P21462 350 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 CCR4P51679 360 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 CLNS1AP54105 237 aaKnown RBP14.51□□□□□ -0.09
COL9A3-208ENST00000469802 RAC3P60763 192 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 STX3Q13277 289 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 MAPK14Q16539 360 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 TMEM201Q5SNT2 666 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 ANXA8L1Q5VT79 327 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 TYW3Q6IPR3 259 aaKnown RBP14.51□□□□□ -0.09
COL9A3-208ENST00000469802 C3orf33Q6P1S2 294 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 C16orf62Q7Z3J2 963 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 NUFIP2Q7Z417 695 aaKnown RBP14.51□□□□□ -0.09
COL9A3-208ENST00000469802 TUSC5Q8IXB3 177 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 RFWD2Q8NHY2 731 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 REXO5Q96IC2 774 aaKnown RBP14.51□□□□□ -0.09
COL9A3-208ENST00000469802 CCDC115Q96NT0 180 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 TMEM204Q9BSN7 226 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 CENPHQ9H3R5 247 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 GSX1Q9H4S2 264 aaPredicted RBP14.51□□□□□ -0.09
COL9A3-208ENST00000469802 BCO1Q9HAY6 547 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 PNPOQ9NVS9 261 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 PCDHGB4Q9UN71 923 aa14.51□□□□□ -0.09
COL9A3-208ENST00000469802 PRAMEF27A3QJZ7 478 aa14.5□□□□□ -0.09
COL9A3-208ENST00000469802 SDHDO14521 159 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms