RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 NUP62CLQ9H1M0 184 aa4.14□□□□□ -1.75
VPS8-219ENST00000469479 OPN3Q9H1Y3 402 aaPredicted RBP4.14□□□□□ -1.75
VPS8-219ENST00000469479 CCDC68Q9H2F9 335 aa4.14□□□□□ -1.75
VPS8-219ENST00000469479 METTL7AQ9H8H3 244 aa4.14□□□□□ -1.75
VPS8-219ENST00000469479 COPS7BQ9H9Q2 264 aaPredicted RBP4.14□□□□□ -1.75
VPS8-219ENST00000469479 RNF122Q9H9V4 155 aa4.14□□□□□ -1.75
VPS8-219ENST00000469479 GLRX2Q9NS18 164 aa4.14□□□□□ -1.75
VPS8-219ENST00000469479 TEX10Q9NXF1 929 aaPredicted RBP4.14□□□□□ -1.75
VPS8-219ENST00000469479 CRYL1Q9Y2S2 319 aa4.14□□□□□ -1.75
VPS8-219ENST00000469479 WBP11Q9Y2W2 641 aaKnown RBP4.14□□□□□ -1.75
VPS8-219ENST00000469479 FKBP7Q9Y680 259 aa4.14□□□□□ -1.75
VPS8-219ENST00000469479 AKR1B15C9JRZ8 316 aaPredicted RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 E7EVH7 732 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 ERI3O43414 337 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 TGFAP01135 160 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 PEPDP12955 493 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 NPPBP16860 134 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 ZNF708P17019 499 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 NAGAP17050 411 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 OGNP20774 298 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 DPP4P27487 766 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 SRD5A2P31213 254 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 CASP3P42574 277 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 HTR3AP46098 478 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 STT3AP46977 705 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 NPY2RP49146 381 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 RGS4P49798 205 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 LHX2P50458 406 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 PDLIM4P50479 330 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 EFNA4P52798 201 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 SIRPAP78324 504 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 ZBED6P86452 979 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 ROR2Q01974 943 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 SRYQ05066 204 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 CHRNB3Q05901 458 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 GPS1Q13098 491 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 NAE1Q13564 534 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 KCNJ11Q14654 390 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 SLC18A3Q16572 532 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 PGGHGQ32M88 737 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 TOR1AIP1Q5JTV8 583 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 CTSL3PQ5NE16 218 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 DUPD1Q68J44 220 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 TRIM40Q6P9F5 258 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 AGTRAPQ6RW13 159 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 ZDHHC24Q6UX98 284 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 IL17RELQ6ZVW7 336 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 OVCH2Q7RTZ1 564 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 APTXQ7Z2E3 356 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 KCTD20Q7Z5Y7 419 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 TBC1D1Q86TI0 1168 aaPredicted RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 C9orf40Q8IXQ3 194 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 FAM47BQ8NA70 645 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 SRFBP1Q8NEF9 429 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 PPP1R35Q8TAP8 253 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 ACTL9Q8TC94 416 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 ZNF721Q8TF20 911 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 KCTD4Q8WVF5 259 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 MRPL24Q96A35 216 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 SNF8Q96H20 258 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 RBM18Q96H35 190 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 SENP5Q96HI0 755 aaPredicted RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 BIRC8Q96P09 236 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 DGAT2Q96PD7 388 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 GAL3ST4Q96RP7 486 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 SERINC2Q96SA4 455 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 NDNQ99608 321 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 ELAC2Q9BQ52 826 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 GATA5Q9BWX5 397 aaPredicted RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 CACNG6Q9BXT2 260 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 TRIM2Q9C040 744 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 WWTR1Q9GZV5 400 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 STMN4Q9H169 189 aaPredicted RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 PELI2Q9HAT8 420 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 SMURF2Q9HAU4 748 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 PARVBQ9HBI1 364 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 LYRM4Q9HD34 91 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 CBLN4Q9NTU7 201 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 INTS10Q9NVR2 710 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 MED29Q9NX70 200 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 MS4A12Q9NXJ0 267 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 PAQR5Q9NXK6 330 aaPredicted RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 TAS2R10Q9NYW0 307 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 MARCH4Q9P2E8 410 aaPredicted RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 FBXO9Q9UK97 447 aaPredicted RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 EXO1Q9UQ84 846 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 R3HDM2Q9Y2K5 976 aaKnown RBP4.13□□□□□ -1.75
VPS8-219ENST00000469479 CLDN16Q9Y5I7 305 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 MMP24Q9Y5R2 645 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 TRRAPQ9Y4A5 3859 aa4.13□□□□□ -1.75
VPS8-219ENST00000469479 DYSFO75923 2080 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 HEATR5BQ9P2D3 2071 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 A0A0B4J293 547 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 A0A1W2PPL8 197 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 LOC390937A0A1W2PQ73 354 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 GOLGA6L9A6NEM1 432 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 GOLGA8TH3BQL2 631 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 NDUFS7O75251 213 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 NIPSNAP2O75323 286 aa4.12□□□□□ -1.75
VPS8-219ENST00000469479 TGM6O95932 706 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms