RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 NPIPA5A0A0B4J1W7 369 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 NPIPA7E9PJI5 369 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 MITFO75030 526 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-213ENST00000469300 NPIPA8P0DM63 369 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 IRF2P14316 349 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 MAP2K4P45985 399 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 WNT4P56705 351 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 PRKCDQ05655 676 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 ZP2Q05996 745 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 PIP5KL1Q5T9C9 394 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 FRMPD2BQ6IN97 320 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 IL20RBQ6UXL0 311 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 TMEM64Q6YI46 380 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 GATAD2BQ8WXI9 593 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 MKRN2Q9H000 416 aaKnown RBP14.07□□□□□ -0.16
LIMS2-213ENST00000469300 ATP13A2Q9NQ11 1180 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 LOC102725191A0A1B0GVB3 256 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 SERINC4A6NH21 518 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 LCN1P31025 176 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 PCBD1P61457 104 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 MAT1AQ00266 395 aaKnown RBP14.07□□□□□ -0.16
LIMS2-213ENST00000469300 CHRNEQ04844 493 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 RAB40BQ12829 278 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 CCNJQ5T5M9 372 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 FRS2Q8WU20 508 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 CCNL2Q96S94 520 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-213ENST00000469300 FOXQ1Q9C009 403 aa14.07□□□□□ -0.16
LIMS2-213ENST00000469300 TMEM265A0A087WTH1 108 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 METTL12A8MUP2 240 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 MTHFD2P13995 350 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 MRPL2Q5T653 305 aaKnown RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 MSLNLQ96KJ4 702 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 TMEM121BQ9BXQ6 578 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 CHRDQ9H2X0 955 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 OR52D1Q9H346 318 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 CNOT2Q9NZN8 540 aaKnown RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 DHCR7Q9UBM7 475 aaKnown RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 INMT-MINDY4F8WBC2 141 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 TRHRP34981 398 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 EIF1P41567 113 aaKnown RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 SLC6A12P48065 614 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 RAB5BP61020 215 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 PDE7AQ13946 482 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 ELAVL1Q15717 326 aaKnown RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 SLC6A19Q695T7 634 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 RAB12Q6IQ22 244 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 ZNF584Q8IVC4 421 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 SLC35F2Q8IXU6 374 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 INO80EQ8NBZ0 244 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 OR5AK2Q8NH90 309 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 FAM46BQ96A09 425 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 PFDN5Q99471 154 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 RANBP3Q9H6Z4 567 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 METTL8Q9H825 291 aaKnown RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 ITGAMP11215 1152 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 PRKAR1BP31321 381 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 OR1D5P58170 312 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 NKAIN1Q4KMZ8 207 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 FAM76BQ5HYJ3 339 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 FAM205BPQ63HN1 556 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 PGM2L1Q6PCE3 622 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 VRK2Q86Y07 508 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 SLC7A5P1Q8MH63 180 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 INTS14Q96SY0 518 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 TEX101Q9BY14 249 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 TMEM38AQ9H6F2 299 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 TMEM185BQ9H7F4 350 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 FOLH1BQ9HBA9 442 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 GPR83Q9NYM4 423 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 KCNIP3Q9Y2W7 256 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 LRIT2A6NDA9 550 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 ALOX12BO75342 701 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 ZNF35P13682 527 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 VAMP1P23763 118 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 MSX1P28360 303 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 HNRNPFP52597 415 aaKnown RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 AP2S1P53680 142 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 TSPAN31Q12999 210 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 CCSMST1Q4G0I0 132 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 TMEM69Q5SWH9 247 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 PODNL1Q6PEZ8 512 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 FAM111BQ6SJ93 734 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 TMEM178AQ8NBL3 297 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 OR2T11Q8NH01 316 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 SLC38A5Q8WUX1 472 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 ZNF486Q96H40 463 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 GPR78Q96P69 363 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 SGPP1Q9BX95 441 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 GLIPR2Q9H4G4 154 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 A4GALTQ9NPC4 353 aa14.06□□□□□ -0.16
LIMS2-213ENST00000469300 USP36Q9P275 1121 aaKnown RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 HEMK1Q9Y5R4 338 aaPredicted RBP14.06□□□□□ -0.16
LIMS2-213ENST00000469300 IGHG1P01857 330 aa14.05□□□□□ -0.16
LIMS2-213ENST00000469300 CDK5R2Q13319 367 aa14.05□□□□□ -0.16
LIMS2-213ENST00000469300 PLEKHN1Q494U1 663 aaPredicted RBP14.05□□□□□ -0.16
LIMS2-213ENST00000469300 PAPD5Q8NDF8 572 aaKnown RBP14.05□□□□□ -0.16
LIMS2-213ENST00000469300 SAP130Q9H0E3 1048 aa14.05□□□□□ -0.16
LIMS2-213ENST00000469300 GPR52Q9Y2T5 361 aa14.05□□□□□ -0.16
LIMS2-213ENST00000469300 RRP8O43159 456 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms