RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 TMED10P49755 219 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 NR0B1P51843 470 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 NUDT6P53370 316 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 EMP2P54851 167 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 SNAPC1Q16533 368 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 PLA2G2CQ5R387 149 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 SYT6Q5T7P8 510 aaPredicted RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 FNDC7Q5VTL7 733 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 GPR107Q5VW38 600 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 WBP2NLQ6ICG8 309 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 PAPD4Q6PIY7 484 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 HSDL2Q6YN16 418 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 TMPRSS11FQ6ZWK6 438 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF367Q7RTV3 350 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 MISPQ8IVT2 679 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 NLGN4XQ8N0W4 816 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 CADM2Q8N3J6 435 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 TCEANCQ8N8B7 351 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF321PQ8N8H1 164 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 BMPERQ8N8U9 685 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF441Q8N8Z8 693 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 OR8K3Q8NH51 312 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 NUBPLQ8TB37 319 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 PHOSPHO1Q8TCT1 267 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 SGCDQ92629 289 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 GGHQ92820 318 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 RFKQ969G6 155 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 C12orf43Q96C57 262 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 BPIFA2Q96DR5 249 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 OMA1Q96E52 524 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF426Q9BUY5 554 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 TSSK6Q9BXA6 273 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 SLC19A3Q9BZV2 496 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 EGLN3Q9H6Z9 239 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 C12orf10Q9HB07 376 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 HHATLQ9HCP6 504 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 RYDENQ9NUL5 291 aaKnown RBP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 OCIAD1Q9NX40 245 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 TVP23BQ9NYZ1 205 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 FLRT3Q9NZU0 649 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 AASSQ9UDR5 926 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMC1A-205ENST00000469129 SEC16AO15027 2179 aa8.59□□□□□ -1.03
SMC1A-205ENST00000469129 ZFHX2Q9C0A1 2572 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-205ENST00000469129 LNP1A1A4G5 178 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 OR6C70A6NIJ9 312 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ELOA3DA6NLF2 546 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-205ENST00000469129 H3BMQ9 156 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 M0R129 80 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 MEN1O00255 615 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 PRODHO43272 600 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 TSPAN2O60636 221 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ENTPD6O75354 484 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 IGF2P01344 180 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 IGHEP01854 428 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 SAGP10523 405 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-205ENST00000469129 DBTP11182 482 aaKnown RBP8.58□□□□□ -1.04
SMC1A-205ENST00000469129 SLC15A1P46059 708 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 MASP1P48740 699 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-205ENST00000469129 CCR4P51679 360 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 EFNA3P52797 238 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 RNF4P78317 190 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 E2F1Q01094 437 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF91Q05481 1191 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 PIGFQ07326 219 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ST3GAL4Q11206 333 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 SKP2Q13309 424 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ELOA3BQ3SY89 546 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 KLHL22Q53GT1 634 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 PLAG1Q6DJT9 500 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 FAAH2Q6GMR7 532 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 TCEAL6Q6IPX3 200 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 MRPL14Q6P1L8 145 aaKnown RBP8.58□□□□□ -1.04
SMC1A-205ENST00000469129 TMEM205Q6UW68 189 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 KIRREL2Q6UWL6 708 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 WDR88Q6ZMY6 472 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 CPEB2Q7Z5Q1 589 aaKnown RBP8.58□□□□□ -1.04
SMC1A-205ENST00000469129 LAPTM4BQ86VI4 370 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 GID4Q8IVV7 300 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 IQCF1Q8N6M8 205 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ZSCAN1Q8NBB4 408 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 SUMF1Q8NBK3 374 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 SLC38A9Q8NBW4 561 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ELOA3Q8NG57 546 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 OR5L2Q8NGL0 311 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 OR8D4Q8NGM9 314 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 OR4C3Q8NH37 302 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 TCEAL3Q969E4 200 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 UBE2FQ969M7 185 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 COG8Q96MW5 612 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 IL4I1Q96RQ9 567 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ADOQ96SZ5 270 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 SPSB2Q99619 263 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 CMKLR1Q99788 373 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 GPA33Q99795 319 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ZPBPQ9BS86 351 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 CDCA4Q9BXL8 241 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 DPH1Q9BZG8 443 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms