RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FAM120CQ9NX05 1096 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 TEX10Q9NXF1 929 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 GAR1Q9NY12 217 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 OR6C2Q9NZP2 312 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 H2AFY2Q9P0M6 372 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 UXTQ9UBK9 157 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MGAT4CQ9UBM8 478 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 GRHPRQ9UBQ7 328 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 UPB1Q9UBR1 384 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 B4GALT6Q9UBX8 382 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 GPR34Q9UPC5 381 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 NEU3Q9UQ49 428 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 EXO1Q9UQ84 846 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 YBX2Q9Y2T7 364 aaKnown RBP4.53□□□□□ -1.68
SF3B1-207ENST00000468925 KPTNQ9Y664 436 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MTCH2Q9Y6C9 303 aa4.53□□□□□ -1.68
SF3B1-207ENST00000468925 MYO18AQ92614 2054 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 GBF1Q92538 1859 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 COL2A1P02458 1487 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 A0A087X0M5 115 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 A0A1B0GX30 115 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 MEX3AA1L020 520 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 BTBD17A6NE02 478 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 UNC119BA6NIH7 251 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 A6NLC8 198 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 COLCA2A8K830 154 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SUPT3HB4E1H0 165 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 F5H5P2 479 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 H7C417 338 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 GFYI3L273 518 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF593O00488 134 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 RFXANKO14593 260 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 FGF16O43320 207 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 OR2T1O43869 369 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 BEST1O76090 585 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 RPP14O95059 124 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LATS1O95835 1130 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 PLGP00747 810 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 VIPP01282 170 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 KLK3P07288 261 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 OR4E1P0C645 316 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 COX5BP10606 129 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 BCKDHAP12694 445 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ADRB3P13945 408 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 MTHFD2P13995 350 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 MYOGP15173 224 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 GOT1P17174 413 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 GSTM3P21266 225 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 GIFP27352 417 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 HTR2CP28335 458 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 CD1CP29017 333 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 BTCP35070 178 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 NNMTP40261 264 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 KIR3DL2P43630 455 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SULT1E1P49888 294 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 AGFG1P52594 562 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 GFRA1P56159 465 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 DAOAP59103 153 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 TPI1P60174 286 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SORDQ00796 357 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SSBP1Q04837 148 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 CTBP1Q13363 440 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ALKBH1Q13686 389 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 PTGES3Q15185 160 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 CNN3Q15417 329 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 RBBP7Q16576 425 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 CDO1Q16878 200 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 DUOXA1Q1HG43 343 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 FAM174BQ3ZCQ3 159 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 AARDQ4LEZ3 155 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SOWAHCQ53LP3 525 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 MANEAQ5SRI9 462 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ARMC12Q5T9G4 340 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ARHGAP40Q5TG30 622 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LIPKQ5VXJ0 399 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LIPJQ5W064 366 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 OLFML2AQ68BL7 652 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 C12orf73Q69YU5 71 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ABLIM2Q6H8Q1 611 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ADNP2Q6IQ32 1131 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 FAM199XQ6PEV8 388 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 PAPD4Q6PIY7 484 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 HHIPL2Q6UWX4 724 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ALKAL2Q6UX46 152 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 Q6ZSR9 355 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 RTL10Q7L3V2 364 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 NDUFAF7Q7L592 441 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 CXXC5Q7LFL8 322 aaKnown RBP4.52□□□□□ -1.69
SF3B1-207ENST00000468925 TMPRSS11BQ86T26 416 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 NRSN1Q8IZ57 195 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LGI4Q8N135 537 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 LNX2Q8N448 690 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 KCNRGQ8N5I3 272 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ZNF283Q8N7M2 679 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 SYT14Q8NB59 555 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 HSD17B11Q8NBQ5 300 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 NETO2Q8NC67 525 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 CHST14Q8NCH0 376 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 ACVR1CQ8NER5 493 aa4.52□□□□□ -1.69
SF3B1-207ENST00000468925 OR10H5Q8NGA6 315 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms