RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 IMPDH1P20839 514 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 NTF4P34130 210 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 FOXG1P55316 489 aaPredicted RBP16.39■□□□□ 0.21
LINC00888-201ENST00000468380 CR1LQ2VPA4 569 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 NDUFAF6Q330K2 333 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 ZNF385BQ569K4 471 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 ZNF100Q8IYN0 542 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.39■□□□□ 0.21
LINC00888-201ENST00000468380 ZDHHC18Q9NUE0 388 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 TMEM216Q9P0N5 145 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 WBP11Q9Y2W2 641 aaKnown RBP16.39■□□□□ 0.21
LINC00888-201ENST00000468380 ACTL7BQ9Y614 415 aa16.39■□□□□ 0.21
LINC00888-201ENST00000468380 GPC6Q9Y625 555 aaPredicted RBP16.39■□□□□ 0.21
LINC00888-201ENST00000468380 MGAM2Q2M2H8 2515 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 NPIPA5A0A0B4J1W7 369 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 ESYT3A0FGR9 886 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 TRIM49D1C9J1S8 452 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 NPIPA7E9PJI5 369 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 M0R1B8 84 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 NUDT14O95848 222 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 INHBAP08476 426 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 NPIPA8P0DM63 369 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 HNF1AP20823 631 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 LCN1P31025 176 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 GPC1P35052 558 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 PDLIM4P50479 330 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 P2RX1P51575 399 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 KLHL26Q53HC5 615 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 FBXW9Q5XUX1 488 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 NOXRED1Q6NXP6 359 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 KLHL17Q6TDP4 642 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 LRIG3Q6UXM1 1119 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 GALNT5Q7Z7M9 940 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 RFLNBQ8N5W9 214 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 MRGPRX4Q96LA9 322 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 PAFAH2Q99487 392 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 FUT8Q9BYC5 575 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 ADAM19Q9H013 955 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 ANKZF1Q9H8Y5 726 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 ATP23Q9Y6H3 246 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 PMF1-BGLAPU3KQ54 211 aa16.38■□□□□ 0.21
LINC00888-201ENST00000468380 CIB4A0PJX0 185 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 KIF2AO00139 706 aaPredicted RBP16.37■□□□□ 0.21
LINC00888-201ENST00000468380 TCF21O43680 179 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 H6PDO95479 791 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 APOBEC3AP31941 199 aaPredicted RBP16.37■□□□□ 0.21
LINC00888-201ENST00000468380 SERPINB4P48594 390 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 PKNOX1P55347 436 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 CHRNB3Q05901 458 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 LCP2Q13094 533 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 KIAA0040Q15053 153 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 SWI5Q1ZZU3 235 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC00888-201ENST00000468380 C12orf54Q6X4T0 127 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 MTERF4Q7Z6M4 381 aaKnown RBP16.37■□□□□ 0.21
LINC00888-201ENST00000468380 DEPDC4Q8N2C3 294 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 COX18Q8N8Q8 333 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 WDR31Q8NA23 367 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 DCAKDQ8WVC6 231 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 MUS81Q96NY9 551 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 SORCS2Q96PQ0 1159 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 RAB17Q9H0T7 212 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 GIN1Q9NXP7 522 aa16.37■□□□□ 0.21
LINC00888-201ENST00000468380 CCT8L1PA6NM43 557 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 NPIPB8E9PQR5 432 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 PDPK1O15530 556 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 ALOX5P09917 674 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 EGR1P18146 543 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 TAC1P20366 129 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 SLC7A1P30825 629 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 PHBP35232 272 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 SERPINB9P50453 376 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 PRKAA2P54646 552 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 SLC7A5Q01650 507 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 SELENBP1Q13228 472 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 GABRA6Q16445 453 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 SLC25A53Q5H9E4 307 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 IKBIPQ70UQ0 350 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 SZRD1Q7Z422 152 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 TRIM46Q7Z4K8 759 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 FAM76AQ8TAV0 307 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 MS4A4EQ96PG1 132 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 PIMREGQ9BSJ6 248 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 BTBD2Q9BX70 525 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 C12orf65Q9H3J6 166 aaKnown RBP16.36■□□□□ 0.21
LINC00888-201ENST00000468380 TRAF6Q9Y4K3 522 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 CCL27Q9Y4X3 112 aa16.36■□□□□ 0.21
LINC00888-201ENST00000468380 ESPNB1AK53 854 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 NDUFS8O00217 210 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 BMP4P12644 408 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 EFNA1P20827 205 aaPredicted RBP16.35■□□□□ 0.21
LINC00888-201ENST00000468380 FRKP42685 505 aaPredicted RBP16.35■□□□□ 0.21
LINC00888-201ENST00000468380 SUMO3P55854 103 aaPredicted RBP16.35■□□□□ 0.21
LINC00888-201ENST00000468380 POU6F2P78424 691 aaPredicted RBP16.35■□□□□ 0.21
LINC00888-201ENST00000468380 UBE2J2Q8N2K1 259 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 CDS1Q92903 461 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 L3HYPDHQ96EM0 354 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 OR5B2Q96R09 309 aa16.35■□□□□ 0.21
LINC00888-201ENST00000468380 QRSL1Q9H0R6 528 aaKnown RBP16.35■□□□□ 0.21
LINC00888-201ENST00000468380 GSTO2Q9H4Y5 243 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms