RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 MOAP1Q96BY2 351 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 REXO5Q96IC2 774 aaKnown RBP21.78■■□□□ 1.08
PTCH1-210ENST00000468211 PPP1R36Q96LQ0 422 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 GSX2Q9BZM3 304 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 ING1Q9UK53 422 aaPredicted RBP21.78■■□□□ 1.08
PTCH1-210ENST00000468211 ABCA2Q9BZC7 2435 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 CSPG4Q6UVK1 2322 aa21.78■■□□□ 1.08
PTCH1-210ENST00000468211 A0A1W2PNR3 127 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 ZNF264O43296 627 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 FCMRO60667 390 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 PABPC4LP0CB38 370 aaKnown RBP21.77■■□□□ 1.08
PTCH1-210ENST00000468211 CASP9P55211 416 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 QPRTQ15274 297 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 RNPS1Q15287 305 aaKnown RBP21.77■■□□□ 1.08
PTCH1-210ENST00000468211 SLC25A53Q5H9E4 307 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 C6orf120Q7Z4R8 191 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 OR5W2Q8NH69 310 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 ZFP90Q8TF47 636 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 MRGPRX4Q96LA9 322 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 OR10A4Q9H209 315 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 TIGARQ9NQ88 270 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 CADP27708 2225 aa21.77■■□□□ 1.08
PTCH1-210ENST00000468211 WDR91A4D1P6 747 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 SERINC4A6NH21 518 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 UBL4AP11441 157 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 MATN1P21941 496 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 CCR4P51679 360 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 NR1H2P55055 460 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 GPR68Q15743 365 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 PDCD2Q16342 344 aaPredicted RBP21.76■■□□□ 1.07
PTCH1-210ENST00000468211 NUDCD3Q8IVD9 361 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 TMCO5AQ8N6Q1 288 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF781Q8N8C0 355 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 C20orf27Q9GZN8 174 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 QRSL1Q9H0R6 528 aaKnown RBP21.76■■□□□ 1.07
PTCH1-210ENST00000468211 FANCFQ9NPI8 374 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 ASIC5Q9NY37 505 aa21.76■■□□□ 1.07
PTCH1-210ENST00000468211 GJE1A6NN92 205 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 ETV2O00321 342 aaPredicted RBP21.75■■□□□ 1.07
PTCH1-210ENST00000468211 HS3ST1O14792 307 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 EIF4E2O60573 245 aaKnown RBP21.75■■□□□ 1.07
PTCH1-210ENST00000468211 PRKD3O94806 890 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 SOX30O94993 753 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 H6PDO95479 791 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 EDNRAP25101 427 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 PHC1P78364 1004 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 SELENBP1Q13228 472 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 SKP2Q13309 424 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 ATG4DQ86TL0 474 aaPredicted RBP21.75■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF619Q8N2I2 560 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 STEAP2Q8NFT2 490 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 LILRB1Q8NHL6 650 aaPredicted RBP21.75■■□□□ 1.07
PTCH1-210ENST00000468211 BDH2Q9BUT1 245 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 THUMPD3Q9BV44 507 aaKnown RBP21.75■■□□□ 1.07
PTCH1-210ENST00000468211 NMUR2Q9GZQ4 415 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 AKTIPQ9H8T0 292 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 NOP53Q9NZM5 478 aaKnown RBP21.75■■□□□ 1.07
PTCH1-210ENST00000468211 MKLN1Q9UL63 735 aa21.75■■□□□ 1.07
PTCH1-210ENST00000468211 RNF103-CHMP3A0A140T963 221 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF814B7Z6K7 855 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 DNAJA2O60884 412 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 SCN2BO60939 215 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 UGT2B17O75795 530 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 YES1P07947 543 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 TAB1Q15750 504 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF141Q15928 474 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 SFRP5Q5T4F7 317 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF611Q8N823 705 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 TOR1AIP2Q8NFQ8 470 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 AKAP1Q92667 903 aaKnown RBP eCLIP21.74■■□□□ 1.07
PTCH1-210ENST00000468211 SLC35G5Q96KT7 338 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 PSD2Q9BQI7 771 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 TMEM109Q9BVC6 243 aa21.74■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF701Q9NV72 531 aaPredicted RBP21.74■■□□□ 1.07
PTCH1-210ENST00000468211 JMJD1CQ15652 2540 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 C9JVG2 144 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 BCAS1O75363 584 aaPredicted RBP21.73■■□□□ 1.07
PTCH1-210ENST00000468211 CYP7B1O75881 506 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 ADAP00813 363 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 PAX1P15863 534 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 RAC3P60763 192 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 MAD2L1Q13257 205 aaPredicted RBP21.73■■□□□ 1.07
PTCH1-210ENST00000468211 CBFBQ13951 182 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 CHI3L2Q15782 390 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 MAPK14Q16539 360 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 ARHGAP11BQ3KRB8 267 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 TIGD2Q4W5G0 525 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 EMBQ6PCB8 327 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 BHLHB9Q6PI77 547 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 SEZ6L2Q6UXD5 910 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 ANKRD46Q86W74 232 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 LSRQ86X29 649 aaPredicted RBP21.73■■□□□ 1.07
PTCH1-210ENST00000468211 TMEM171Q8WVE6 324 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF775Q96BV0 537 aaPredicted RBP21.73■■□□□ 1.07
PTCH1-210ENST00000468211 ZNF350Q9GZX5 532 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 LAT2Q9GZY6 243 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 OR51I1Q9H343 314 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 GP6Q9HCN6 339 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 PRSS50Q9UI38 385 aa21.73■■□□□ 1.07
PTCH1-210ENST00000468211 FAM171A2A8MVW0 826 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms