RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 ZNF766Q5HY98 468 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 ZNF311Q5JNZ3 666 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 Q6ZS92 163 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 STK32CQ86UX6 486 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 ZNF614Q8N883 585 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 OR5K1Q8NHB7 308 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 NRBF2Q96F24 287 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 WBP1Q96G27 269 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 SCMH1Q96GD3 660 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 FRMD6Q96NE9 622 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 DOHHQ9BU89 302 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 DCAF13Q9NV06 445 aaKnown RBP13.49□□□□□ -0.25
DDX56-208ENST00000467318 SLC35A3Q9Y2D2 325 aa13.49□□□□□ -0.25
DDX56-208ENST00000467318 TNRC6AQ8NDV7 1962 aaKnown RBP13.48□□□□□ -0.25
DDX56-208ENST00000467318 BOD1L1Q8NFC6 3051 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 SERINC4A6NH21 518 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 K7EM74 188 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 NME2P1O60361 137 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 NOL3O60936 208 aaKnown RBP13.48□□□□□ -0.25
DDX56-208ENST00000467318 SNAP29O95721 258 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 ANGPTL1O95841 491 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 CST1P01037 141 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 ALPLP05186 524 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 JUNBP17275 347 aaPredicted RBP13.48□□□□□ -0.25
DDX56-208ENST00000467318 NME2P22392 152 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 PRKAR1BP31321 381 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 FGFBP1Q14512 234 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 PRAMEF20Q5VT98 475 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 APOOLQ6UXV4 268 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 EIF3MQ7L2H7 374 aaKnown RBP13.48□□□□□ -0.25
DDX56-208ENST00000467318 THAP5Q7Z6K1 395 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 HIPK1Q86Z02 1210 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 PHOSPHO1Q8TCT1 267 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 LZICQ8WZA0 190 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 NTNG2Q96CW9 530 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 BLOC1S6Q9UL45 172 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 B3GNT3Q9Y2A9 372 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 ORC6Q9Y5N6 252 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 CSAG2Q9Y5P2 127 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 WIF1Q9Y5W5 379 aa13.48□□□□□ -0.25
DDX56-208ENST00000467318 NBEAQ8NFP9 2946 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 PTGDSP41222 190 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 CD97P48960 835 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 GAS1P54826 345 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 CDH15P55291 814 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 IL18R1Q13478 541 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 LRRC23Q53EV4 343 aaPredicted RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 BICRALQ6AI39 1079 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 DHRS4L2Q6PKH6 230 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 GALNTL5Q7Z4T8 443 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 MARCH3Q86UD3 253 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 CLVS1Q8IUQ0 354 aaPredicted RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 CROCCP3Q8IVE0 287 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 C8orf59Q8N0T1 100 aaPredicted RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 PIAS4Q8N2W9 510 aaPredicted RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 RBMXL3Q8N7X1 1067 aaKnown RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 HDAC2Q92769 488 aaKnown RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 TMIGD2Q96BF3 282 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 TMEM41AQ96HV5 264 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 FAM173AQ9BQD7 235 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 PINK1Q9BXM7 581 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 SLC25A18Q9H1K4 315 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 PROK2Q9HC23 129 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 GALNT9Q9HCQ5 603 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 KLHL1Q9NR64 748 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 ZNF443Q9Y2A4 671 aaPredicted RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 CENPVL1A0A0U1RR11 272 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 GTPBP1O00178 669 aaKnown RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 SCO2O43819 266 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 CSTAP01040 98 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 ELAVL4P26378 380 aaKnown RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 RAD23AP54725 363 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 DCTN2Q13561 401 aaKnown RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 EIPR1Q53HC9 387 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 OTUD3Q5T2D3 398 aaPredicted RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 FNDC7Q5VTL7 733 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 ZNF773Q6PK81 442 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 VRK2Q86Y07 508 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 GRAMD2AQ8IUY3 354 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 EXD3Q8N9H8 876 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 FAM98AQ8NCA5 519 aaKnown RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 SLC35B4Q969S0 331 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 TAMM41Q96BW9 452 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 PYURFQ96I23 114 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 EVA1AQ9H8M9 152 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 ZNF71Q9NQZ8 489 aaPredicted RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 ADPRHL2Q9NX46 363 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 RPS6KA6Q9UK32 745 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 BAG5Q9UL15 447 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 SAMD4AQ9UPU9 718 aaKnown RBP13.47□□□□□ -0.25
DDX56-208ENST00000467318 V9GYQ6 96 aa13.47□□□□□ -0.25
DDX56-208ENST00000467318 PIEZO2Q9H5I5 2752 aa13.46□□□□□ -0.25
DDX56-208ENST00000467318 CDHR4A6H8M9 788 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 ADAM10O14672 748 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 ZNF264O43296 627 aa13.46□□□□□ -0.26
DDX56-208ENST00000467318 EIF4E2O60573 245 aaKnown RBP13.46□□□□□ -0.26
DDX56-208ENST00000467318 TRIM3O75382 744 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms