RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 SPATA46Q5T0L3 261 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 LIPNQ5VXI9 398 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 GALNT17Q6IS24 598 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF544Q6NX49 715 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 SYT10Q6XYQ8 523 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 DNM1P46Q6ZS02 220 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 FRA10AC1Q70Z53 315 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 MOB1BQ7L9L4 216 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 APTXQ7Z2E3 356 aaKnown RBP1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 C16orf62Q7Z3J2 963 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 SKA3Q8IX90 412 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 C11orf53Q8IXP5 236 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 CADM2Q8N3J6 435 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 KIR3DL3Q8N743 410 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 C14orf178Q8N769 122 aaPredicted RBP1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 SYT14Q8NB59 555 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 DENND6BQ8NEG7 585 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 STEAP2Q8NFT2 490 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 RLN3Q8WXF3 142 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 FRAT1Q92837 279 aaPredicted RBP1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 EMG1Q92979 244 aaKnown RBP1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 FGGYQ96C11 551 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 PELI1Q96FA3 418 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 SDSLQ96GA7 329 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 IL4I1Q96RQ9 567 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 CCNL2Q96S94 520 aaPredicted RBP1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 PLEKHF1Q96S99 279 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 CYP2S1Q96SQ9 504 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 ERP44Q9BS26 406 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 ALG12Q9BV10 488 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 TEX13BQ9BXU2 312 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 GSDMCQ9BYG8 508 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 POLR1EQ9GZS1 481 aaKnown RBP1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 RHBGQ9H310 441 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 SMYD3Q9H7B4 428 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 ELOVL3Q9HB03 270 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 PALMDQ9NP74 551 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 FARSBQ9NSD9 589 aaKnown RBP1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 AIPL1Q9NZN9 384 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 IL17CQ9P0M4 197 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 TBK1Q9UHD2 729 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 DCDC2Q9UHG0 476 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 XPO7Q9UIA9 1087 aaKnown RBP1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 OR10H1Q9Y4A9 318 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 PPIAL4AQ9Y536 164 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 TNRQ92752 1358 aa1.33□□□□□ -2.2
NUCKS1-202ENST00000464938 ARHGAP23Q9P227 1491 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 A8MUI8 341 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 K7N7A8 449 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 SULT2B1O00204 365 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 TNFSF11O14788 317 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 RS1O15537 224 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PGK1P00558 417 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 DUX4L4P0CJ87 422 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF19P17023 458 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PSMB1P20618 241 aaKnown RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 HNF1AP20823 631 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 MMP11P24347 488 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 AQP1P29972 269 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 HPCAL1P37235 193 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ARFIP1P53367 373 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 DIO3P55073 304 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 GNB2P62879 340 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 CBX1P83916 185 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 CCDC57Q2TAC2 916 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 USH1GQ495M9 461 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 CFAP221Q4G0U5 840 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 KLF17Q5JT82 389 aaPredicted RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ATF7IP2Q5U623 682 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 OTPQ5XKR4 325 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 WDR74Q6RFH5 385 aaPredicted RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 SCARA5Q6ZMJ2 495 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 IL34Q6ZMJ4 242 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PPP1R42Q7Z4L9 355 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 SH2D6Q7Z4S9 175 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF683Q8IZ20 524 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ANKFN1Q8N957 763 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 CCDC71LQ8N9Z2 235 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 IPMKQ8NFU5 416 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 OR4D5Q8NGN0 318 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 OR1F12Q8NHA8 337 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 LINC01006Q8NI28 216 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PNPT1Q8TCS8 783 aaKnown RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PAQR8Q8TEZ7 354 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 C7orf33Q8WU49 177 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PIGCQ92535 297 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 NUS1Q96E22 293 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 C16orf74Q96GX8 76 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 COQ2Q96H96 371 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 SH3YL1Q96HL8 342 aaPredicted RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 SENP8Q96LD8 212 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 TGM7Q96PF1 710 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 SLC35A5Q9BS91 424 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 TUBGCP2Q9BSJ2 902 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 CRACR2AQ9BSW2 395 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ZSCAN5AQ9BUG6 496 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 NAT10Q9H0A0 1025 aaKnown RBP1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 ZNF385DQ9H6B1 395 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 FANCFQ9NPI8 374 aa1.32□□□□□ -2.2
NUCKS1-202ENST00000464938 PLSCR3Q9NRY6 295 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms