RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 DNAJA3Q96EY1 480 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 SDF2Q99470 211 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 THUMPD3Q9BV44 507 aaKnown RBP12.33□□□□□ -0.44
RPP40-203ENST00000464646 CXorf56Q9H5V9 222 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 NGBQ9NPG2 151 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 SERINC1Q9NRX5 453 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 EXD2Q9NVH0 621 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 GPATCH2Q9NW75 528 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 MKLN1Q9UL63 735 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 NAV3Q8IVL0 2385 aa12.33□□□□□ -0.44
RPP40-203ENST00000464646 TRIM64A6NGJ6 449 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 TRIM64BA6NI03 449 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 ITM2AO43736 263 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 STX11O75558 287 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 LY6G6DO95868 133 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 ADAP00813 363 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 CSTAP01040 98 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 UBTFL6P0CB48 400 aaPredicted RBP12.32□□□□□ -0.44
RPP40-203ENST00000464646 OR12D1P0DN82 309 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 PRKCAP17252 672 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 ADH6P28332 368 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 PCSK6P29122 969 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 ARRB2P32121 409 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 CHI3L1P36222 383 aaPredicted RBP12.32□□□□□ -0.44
RPP40-203ENST00000464646 PTH2RP49190 550 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 ATP5J2P56134 94 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 CLDN8P56748 225 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 ABCE1P61221 599 aaKnown RBP12.32□□□□□ -0.44
RPP40-203ENST00000464646 EMX2Q04743 252 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 SELENBP1Q13228 472 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.32□□□□□ -0.44
RPP40-203ENST00000464646 ATAD3BQ5T9A4 648 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 TNFAIP8L2Q6P589 184 aaPredicted RBP12.32□□□□□ -0.44
RPP40-203ENST00000464646 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.32□□□□□ -0.44
RPP40-203ENST00000464646 KRTAP1-3Q8IUG1 177 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 ZNF781Q8N8C0 355 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 VPS37AQ8NEZ2 397 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 OR5W2Q8NH69 310 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 RNF128Q8TEB7 428 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 KISS1RQ969F8 398 aaPredicted RBP12.32□□□□□ -0.44
RPP40-203ENST00000464646 GTPBP3Q969Y2 492 aaKnown RBP12.32□□□□□ -0.44
RPP40-203ENST00000464646 MRGPRX4Q96LA9 322 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 QRSL1Q9H0R6 528 aaKnown RBP12.32□□□□□ -0.44
RPP40-203ENST00000464646 OR51I1Q9H343 314 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 KLHL13Q9P2N7 655 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 ICAM5Q9UMF0 924 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 LAMP3Q9UQV4 416 aa12.32□□□□□ -0.44
RPP40-203ENST00000464646 SERINC4A6NH21 518 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 KLF4O43474 513 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 EFNA2O43921 213 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 EIF4E2O60573 245 aaKnown RBP12.31□□□□□ -0.44
RPP40-203ENST00000464646 SERPINE1P05121 402 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 CD3EP07766 207 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 YES1P07947 543 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 MYZAPP0CAP1 466 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 ENPP1P22413 925 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 RYKP34925 604 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 NME5P56597 212 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 HPCAP84074 193 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 RASGEF1BQ0VAM2 473 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 MERTKQ12866 999 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 KRTAP21-3Q3LHN1 58 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 TIGD2Q4W5G0 525 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 GPAT3Q53EU6 434 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 EMBQ6PCB8 327 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 HMGN2P46Q86SG4 172 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 ZNF100Q8IYN0 542 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 CIARTQ8N365 385 aaPredicted RBP12.31□□□□□ -0.44
RPP40-203ENST00000464646 SLC43A2Q8N370 569 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 TMEM234Q8WY98 164 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 RAB8BQ92930 207 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 HDHD5Q9BXW7 423 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 ESRP2Q9H6T0 727 aaKnown RBP12.31□□□□□ -0.44
RPP40-203ENST00000464646 AKTIPQ9H8T0 292 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 KLHL9Q9P2J3 617 aa12.31□□□□□ -0.44
RPP40-203ENST00000464646 FREM1Q5H8C1 2179 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 PRR14LQ5THK1 2151 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 SETD2Q9BYW2 2564 aaPredicted RBP12.3□□□□□ -0.44
RPP40-203ENST00000464646 MTORP42345 2549 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 HS3ST1O14792 307 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 LYZL6O75951 148 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 AK1P00568 194 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 HEXAP06865 529 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 PGCP20142 388 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 CCNA2P20248 432 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 PSMB1P20618 241 aaKnown RBP12.3□□□□□ -0.44
RPP40-203ENST00000464646 SLC1A6P48664 564 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 PPP2R2BQ00005 443 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 EXOSC6Q5RKV6 272 aaKnown RBP12.3□□□□□ -0.44
RPP40-203ENST00000464646 ANXA8L1Q5VT79 327 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 C3orf33Q6P1S2 294 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 TFAP2EQ6VUC0 442 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 EIF3MQ7L2H7 374 aaKnown RBP12.3□□□□□ -0.44
RPP40-203ENST00000464646 BHLHA15Q7RTS1 189 aaPredicted RBP12.3□□□□□ -0.44
RPP40-203ENST00000464646 UBE2J2Q8N2K1 259 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 RAB3IL1Q8TBN0 382 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 AENQ8WTP8 325 aaKnown RBP12.3□□□□□ -0.44
RPP40-203ENST00000464646 NUF2Q9BZD4 464 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 LAT2Q9GZY6 243 aa12.3□□□□□ -0.44
RPP40-203ENST00000464646 COQ10BQ9H8M1 238 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms