RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 LAMP1P11279 417 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 CCT3P49368 545 aaKnown RBP20.04■□□□□ 0.8
USP4-208ENST00000464168 ATP12AP54707 1039 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 RAC3P60763 192 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 UGT3A2Q3SY77 523 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 SLC25A53Q5H9E4 307 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 DCST2Q5T1A1 773 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 PSMA8Q8TAA3 256 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 MRGPRX4Q96LA9 322 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 PSD2Q9BQI7 771 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 TRMOQ9BU70 441 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 TRAF4Q9BUZ4 470 aaPredicted RBP20.04■□□□□ 0.8
USP4-208ENST00000464168 ACTRT3Q9BYD9 372 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 ANKZF1Q9H8Y5 726 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 GPATCH2Q9NW75 528 aa20.04■□□□□ 0.8
USP4-208ENST00000464168 CR1P17927 2039 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 PLCE1Q9P212 2302 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 A0A1W2PNR3 127 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 TMEM233B4DJY2 109 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 COPEO14579 308 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 CD5LO43866 347 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 ADAM11O75078 769 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 EDNRAP25101 427 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 OR3A2P47893 321 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 HMBOX1Q6NT76 420 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 ADAMTS15Q8TE58 950 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 OR5P2Q8WZ92 322 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 CISD1Q9NZ45 108 aaKnown RBP20.03■□□□□ 0.8
USP4-208ENST00000464168 KLHL9Q9P2J3 617 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 GIMAP2Q9UG22 337 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 PRSS50Q9UI38 385 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 GDF2Q9UK05 429 aaPredicted RBP20.03■□□□□ 0.8
USP4-208ENST00000464168 DTNAQ9Y4J8 743 aa20.03■□□□□ 0.8
USP4-208ENST00000464168 ESPNB1AK53 854 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 C9JVG2 144 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 ETV2O00321 342 aaPredicted RBP20.02■□□□□ 0.8
USP4-208ENST00000464168 TLX2O43763 284 aaPredicted RBP20.02■□□□□ 0.8
USP4-208ENST00000464168 TRIM13O60858 407 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 LYZL6O75951 148 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 FESP07332 822 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 FGF4P08620 206 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 DDX5P17844 614 aaKnown RBP20.02■□□□□ 0.8
USP4-208ENST00000464168 KRT4P19013 534 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 SLC7A1P30825 629 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 HPCAL1P37235 193 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 SELENBP1Q13228 472 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 TP53BP2Q13625 1128 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 PCLAFQ15004 111 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 DTX2Q86UW9 622 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 HIPK1Q86Z02 1210 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 DDIASQ8IXT1 998 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 OR5W2Q8NH69 310 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 TWIST2Q8WVJ9 160 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 ZNF75CPQ92670 426 aaPredicted RBP20.02■□□□□ 0.8
USP4-208ENST00000464168 ZNF775Q96BV0 537 aaPredicted RBP20.02■□□□□ 0.8
USP4-208ENST00000464168 RHOXF2Q9BQY4 288 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 GRIP2Q9C0E4 1043 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 L2HGDHQ9H9P8 463 aa20.02■□□□□ 0.8
USP4-208ENST00000464168 FAF1Q9UNN5 650 aaPredicted RBP20.02■□□□□ 0.8
USP4-208ENST00000464168 NUP214P35658 2090 aaPredicted RBP20.01■□□□□ 0.79
USP4-208ENST00000464168 SHISA9B4DS77 424 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 PIP5K1BO14986 540 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 SMAD9O15198 467 aaKnown RBP20.01■□□□□ 0.79
USP4-208ENST00000464168 CHRNGP07510 517 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 RASGEF1BQ0VAM2 473 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 PPA1Q15181 289 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 STK11Q15831 433 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 GSPT2Q8IYD1 628 aaKnown RBP20.01■□□□□ 0.79
USP4-208ENST00000464168 C4orf33Q8N1A6 199 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 OR56A1Q8NGH5 318 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 RFWD2Q8NHY2 731 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 YAE1D1Q9NRH1 226 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 TRAF6Q9Y4K3 522 aa20.01■□□□□ 0.79
USP4-208ENST00000464168 SMIM23A6NLE4 172 aa20■□□□□ 0.79
USP4-208ENST00000464168 TMEM114B3SHH9 223 aa20■□□□□ 0.79
USP4-208ENST00000464168 EIF4E2O60573 245 aaKnown RBP20■□□□□ 0.79
USP4-208ENST00000464168 CYTIPO60759 359 aa20■□□□□ 0.79
USP4-208ENST00000464168 RPL3P39023 403 aaKnown RBP20■□□□□ 0.79
USP4-208ENST00000464168 C21orf58P58505 322 aa20■□□□□ 0.79
USP4-208ENST00000464168 QPRTQ15274 297 aa20■□□□□ 0.79
USP4-208ENST00000464168 ZNF614Q8N883 585 aa20■□□□□ 0.79
USP4-208ENST00000464168 HS6ST2Q96MM7 605 aa20■□□□□ 0.79
USP4-208ENST00000464168 ZNF300Q96RE9 604 aaPredicted RBP20■□□□□ 0.79
USP4-208ENST00000464168 ALG2Q9H553 416 aa20■□□□□ 0.79
USP4-208ENST00000464168 BARX1Q9HBU1 254 aaPredicted RBP20■□□□□ 0.79
USP4-208ENST00000464168 NBEAL1Q6ZS30 2694 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 ZNF724A8MTY0 619 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 ZNF264O43296 627 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 H6PDO95479 791 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 C6orf47O95873 294 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 KRT16P08779 473 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 PTNP21246 168 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 IGHV1-2P23083 117 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 PTGR1Q14914 329 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 SPDYE7PQ495Y7 208 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 ARL13AQ5H913 290 aaPredicted RBP19.99■□□□□ 0.79
USP4-208ENST00000464168 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.99■□□□□ 0.79
USP4-208ENST00000464168 TMCO5AQ8N6Q1 288 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 TOR1AIP2Q8NFQ8 470 aa19.99■□□□□ 0.79
USP4-208ENST00000464168 COQ8BQ96D53 544 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms