RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 GUSBP1Q15486 140 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 SLC2A7Q6PXP3 512 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 ZNF619Q8N2I2 560 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 GTF2H4Q92759 462 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 LAT2Q9GZY6 243 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 SLC52A3Q9NQ40 469 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 GALNT8Q9NY28 637 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 GPC6Q9Y625 555 aaPredicted RBP11.63□□□□□ -0.55
XRN1-203ENST00000463916 MAP1AP78559 2803 aaPredicted RBP11.63□□□□□ -0.55
XRN1-203ENST00000463916 ZCCHC18P0CG32 403 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 ETFAP13804 333 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 NID1P14543 1247 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 ADH6P28332 368 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 MRPL19P49406 292 aaKnown RBP11.63□□□□□ -0.55
XRN1-203ENST00000463916 SIRPAP78324 504 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 OR2A2Q6IF42 318 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 PPP4R4Q6NUP7 873 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 ESPNLQ6ZVH7 1005 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 EIF3MQ7L2H7 374 aaKnown RBP11.63□□□□□ -0.55
XRN1-203ENST00000463916 FAM71CQ8NEG0 241 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 ATP6V1C2Q8NEY4 427 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 OR2V1Q8NHB1 315 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 LINC01560Q8TB33 94 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 ITCHQ96J02 903 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 TRNT1Q96Q11 434 aaKnown RBP11.63□□□□□ -0.55
XRN1-203ENST00000463916 CCDC28BQ9BUN5 200 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 RBM24Q9BX46 236 aaKnown RBP11.63□□□□□ -0.55
XRN1-203ENST00000463916 PAIP1Q9H074 479 aaKnown RBP11.63□□□□□ -0.55
XRN1-203ENST00000463916 ACBD3Q9H3P7 528 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 TPT1P8Q9HAU6 139 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 POLE3Q9NRF9 147 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 SLAMF8Q9P0V8 285 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 STOML1Q9UBI4 398 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 PACSIN3Q9UKS6 424 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 CLEC4AQ9UMR7 237 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 PCDHB14Q9Y5E9 798 aa11.63□□□□□ -0.55
XRN1-203ENST00000463916 CCDC168Q8NDH2 2452 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 ETV2O00321 342 aaPredicted RBP11.62□□□□□ -0.55
XRN1-203ENST00000463916 SMNDC1O75940 238 aaKnown RBP eCLIP11.62□□□□□ -0.55
XRN1-203ENST00000463916 CGAP01215 116 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 CRHP06850 196 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 HOXB9P17482 250 aaPredicted RBP11.62□□□□□ -0.55
XRN1-203ENST00000463916 ME2P23368 584 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 CBFBQ13951 182 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 SLC25A53Q5H9E4 307 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 C6orf10Q5SRN2 563 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 HBMQ6B0K9 141 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 BLOC1S3Q6QNY0 202 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 ZNF474Q6S9Z5 364 aaPredicted RBP11.62□□□□□ -0.55
XRN1-203ENST00000463916 TOR1AIP2Q8NFQ8 470 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 OSTF1Q92882 214 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 MRGPRX4Q96LA9 322 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 KLHL15Q96M94 604 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 OPN3Q9H1Y3 402 aaPredicted RBP11.62□□□□□ -0.55
XRN1-203ENST00000463916 CCDC167Q9P0B6 97 aa11.62□□□□□ -0.55
XRN1-203ENST00000463916 FOXD3Q9UJU5 478 aaPredicted RBP11.62□□□□□ -0.55
XRN1-203ENST00000463916 ANKRD17O75179 2603 aaKnown RBP11.62□□□□□ -0.55
XRN1-203ENST00000463916 AGAP5A6NIR3 686 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 KRT75O95678 551 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 SESN3P58005 492 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 KCNJ10P78508 379 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 FAM27E3Q08E93 113 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 TMEM176BQ3YBM2 270 aaPredicted RBP11.61□□□□□ -0.55
XRN1-203ENST00000463916 MSANTD1Q6ZTZ1 278 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 ROBO4Q8WZ75 1007 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 CNOT9Q92600 299 aaKnown RBP11.61□□□□□ -0.55
XRN1-203ENST00000463916 NRGNQ92686 78 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 SRXN1Q9BYN0 137 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 PIGMQ9H3S5 423 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 RMND5AQ9H871 391 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 SLC25A37Q9NYZ2 338 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 LIPT1Q9Y234 373 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 TUBAL3A6NHL2 446 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 MSTNO14793 375 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 CTAG2O75638 210 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 ANP32DO95626 131 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 TFPTP0C1Z6 253 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 NR2F1P10589 423 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 CAPN3P20807 821 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 ELK4P28324 431 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 RYKP34925 604 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 CRATP43155 626 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 CPA2P48052 419 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 CARD18P57730 90 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 PAGE3Q5JUK9 113 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 LRRC74BQ6ZQY2 392 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 FAM214BQ7L5A3 538 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 LURAP1LQ8IV03 231 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 MSRB3Q8IXL7 192 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 SLC38A5Q8WUX1 472 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 LRRC46Q96FV0 321 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 COQ10BQ9H8M1 238 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 DCTN4Q9UJW0 460 aa11.61□□□□□ -0.55
XRN1-203ENST00000463916 FAM221AA4D161 298 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 EDF1O60869 148 aaKnown RBP11.6□□□□□ -0.55
XRN1-203ENST00000463916 NUDT7P0C024 238 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 RPS4Y1P22090 263 aaKnown RBP11.6□□□□□ -0.55
XRN1-203ENST00000463916 STX1BP61266 288 aa11.6□□□□□ -0.55
XRN1-203ENST00000463916 HPCAP84074 193 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms