RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ISLR2Q6UXK2 745 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 GFRALQ6UXV0 394 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 Q6ZPB1 254 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SHISA6Q6ZSJ9 500 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 MTERF4Q7Z6M4 381 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 MSRB3Q8IXL7 192 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 RIMKLAQ8IXN7 391 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PRSS58Q8IYP2 241 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CLECL1Q8IZS7 167 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CHDHQ8NE62 594 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 OR2L5Q8NG80 312 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 OR7A2PQ8NGA2 310 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 OR1N1Q8NGS0 311 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PSMF1Q92530 271 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HAS2Q92819 552 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TSLPQ969D9 159 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CIDECQ96AQ7 238 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 VPS33AQ96AX1 596 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ERP27Q96DN0 273 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ARSGQ96EG1 525 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TRMT61AQ96FX7 289 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 INPP5KQ9BT40 448 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CCDC28BQ9BUN5 200 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CHRNA10Q9GZZ6 450 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NUAK2Q9H093 628 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 DDX31Q9H8H2 851 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 BRF2Q9HAW0 419 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CUTCQ9NTM9 273 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 VPS29Q9UBQ0 182 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 FBXW2Q9UKT8 454 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 STK38LQ9Y2H1 464 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PTRH2Q9Y3E5 179 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NBEAL1Q6ZS30 2694 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF469Q96JG9 3925 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 COL6A5A8TX70 2615 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ZGRF1Q86YA3 2104 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TRPC5OSA6NMA1 111 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 GABRR3A8MPY1 467 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ANKRD65E5RJM6 399 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 FXYD1O00168 92 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NR5A2O00482 541 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SOCS6O14544 535 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 UBDO15205 165 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CHST10O43529 356 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 RGS14O43566 566 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 FGF17O60258 216 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PRKNO60260 465 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 LDB3O75112 727 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SEMA3DO95025 777 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ANXA4P09525 319 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SLC35G6P0C7Q6 338 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TMIGD3P0DMS9 266 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 LAMP1P11279 417 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HSD3B1P14060 373 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HOXB9P17482 250 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NCF2P19878 526 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HIST1H1TP22492 207 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HRH2P25021 359 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SSR2P43308 183 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TNFSF10P50591 281 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 RAP1GDS1P52306 607 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 LIM2P55344 173 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NAA20P61599 178 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 DCDP81605 110 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 LTBQ06643 244 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ACSM2AQ08AH3 577 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 FOXD4Q12950 439 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SLAMF1Q13291 335 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 GAB1Q13480 694 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SELPLGQ14242 412 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NAA25Q14CX7 972 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 C3AR1Q16581 482 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HIST2H2ACQ16777 129 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 VPS26BQ4G0F5 336 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PAGE3Q5JUK9 113 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 MLIPQ5VWP3 458 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ACSM2BQ68CK6 577 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 HIST2H2AA3Q6FI13 130 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 OR4F3Q6IEY1 312 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 MEX3BQ6ZN04 569 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 COLCA1Q6ZS62 124 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ANKRD46Q86W74 232 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 NUDT13Q86X67 352 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SNX32Q86XE0 403 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ZCCHC7Q8N3Z6 543 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CPSF7Q8N684 471 aaKnown RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF321PQ8N8H1 164 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 GBP7Q8N8V2 638 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CCDC197Q8NCU1 140 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 TRPV3Q8NET8 790 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CEP70Q8NHQ1 597 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 SUN3Q8TAQ9 357 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ADAMTS15Q8TE58 950 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 WIPF2Q8TF74 440 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 RERGQ96A58 199 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 ANKRD9Q96BM1 317 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 CNRIP1Q96F85 164 aaPredicted RBP3.31□□□□□ -1.88
SCFD1-204ENST00000463622 LRRC46Q96FV0 321 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 FAR2Q96K12 515 aa3.31□□□□□ -1.88
SCFD1-204ENST00000463622 PPP3R2Q96LZ3 170 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms