RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 WHAMMP3Q1A5X7 153 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 CFAP157Q5JU67 520 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 LRIG3Q6UXM1 1119 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 Q6ZSR9 355 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 ZNF527Q8NB42 609 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 OR2T11Q8NH01 316 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 CLHC1Q8NHS4 586 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 ANP32BQ92688 251 aaKnown RBP18.33■□□□□ 0.52
CPSF7-209ENST00000463244 ZNF524Q96C55 264 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 CHMP6Q96FZ7 201 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 ADAD1Q96M93 576 aaKnown RBP18.33■□□□□ 0.52
CPSF7-209ENST00000463244 TNFRSF13CQ96RJ3 184 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 CACNG6Q9BXT2 260 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 HOXD1Q9GZZ0 328 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 PIGUQ9H490 435 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 SIRT3Q9NTG7 399 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-209ENST00000463244 ZCCHC3Q9NUD5 404 aaKnown RBP18.33■□□□□ 0.52
CPSF7-209ENST00000463244 BAIAP2L1Q9UHR4 511 aa18.33■□□□□ 0.52
CPSF7-209ENST00000463244 HEATR1Q9H583 2144 aaKnown RBP18.32■□□□□ 0.52
CPSF7-209ENST00000463244 NPIPA5A0A0B4J1W7 369 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 A0A1W2PNR3 127 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 NPIPA7E9PJI5 369 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 H3BNH8 94 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 PGM3O95394 542 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 NPIPA8P0DM63 369 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 GGT1P19440 569 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 ATP6V1C1P21283 382 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 IGHV1-2P23083 117 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 SLC7A1P30825 629 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 DSCR9P59020 149 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 DNAJB13P59910 316 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 LOXL1Q08397 574 aaPredicted RBP18.32■□□□□ 0.52
CPSF7-209ENST00000463244 RASGEF1BQ0VAM2 473 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 MLC1Q15049 377 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 SLC25A53Q5H9E4 307 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.32■□□□□ 0.52
CPSF7-209ENST00000463244 C11orf71Q6IPW1 123 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 CLEC2AQ6UVW9 174 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 P2RY8Q86VZ1 359 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 MTERF3Q96E29 417 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 RADILQ96JH8 1075 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 TMEM160Q9NX00 188 aa18.32■□□□□ 0.52
CPSF7-209ENST00000463244 PSMC3IPQ9P2W1 217 aaPredicted RBP18.32■□□□□ 0.52
CPSF7-209ENST00000463244 ELOA3DA6NLF2 546 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 ZNF724A8MTY0 619 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 C9JVG2 144 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 SMAD9O15198 467 aaKnown RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 RIPK2O43353 540 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 CYTIPO60759 359 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 GLRA3O75311 464 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 PROCP04070 461 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 TTKP33981 857 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 RPL38P63173 70 aaKnown RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 VLDLRP98155 873 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 NDUFAF6Q330K2 333 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 ELOA3BQ3SY89 546 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 RFTN2Q52LD8 501 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 ARL13AQ5H913 290 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 RNF165Q6ZSG1 346 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 TRMT10CQ7L0Y3 403 aaKnown RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 ELOA3Q8NG57 546 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 OR2W6PQ8NHA6 318 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 ZNF75CPQ92670 426 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 ZNF775Q96BV0 537 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 ZNF300Q96RE9 604 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-209ENST00000463244 ANKZF1Q9H8Y5 726 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 CBLN4Q9NTU7 201 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 OXSMQ9NWU1 459 aa18.31■□□□□ 0.52
CPSF7-209ENST00000463244 OR5H1A6NKK0 313 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 E7EQL1 145 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 NPIPB9F8W1W9 429 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 GTPBP1O00178 669 aaKnown RBP18.3■□□□□ 0.52
CPSF7-209ENST00000463244 ETV2O00321 342 aaPredicted RBP18.3■□□□□ 0.52
CPSF7-209ENST00000463244 URI1O94763 535 aaPredicted RBP18.3■□□□□ 0.52
CPSF7-209ENST00000463244 NEFHP12036 1026 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 ATP12AP54707 1039 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 DCST2Q5T1A1 773 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 CDC73Q6P1J9 531 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 GALNT5Q7Z7M9 940 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 ZNF433Q8N7K0 673 aaPredicted RBP18.3■□□□□ 0.52
CPSF7-209ENST00000463244 DHRS9Q9BPW9 319 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 BEX2Q9BXY8 128 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 TBK1Q9UHD2 729 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 MGAT4BQ9UQ53 548 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 TMED5Q9Y3A6 229 aa18.3■□□□□ 0.52
CPSF7-209ENST00000463244 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
CPSF7-209ENST00000463244 AZIN1O14977 448 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 SLC25A16P16260 332 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 ASMTP46597 345 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 CASP9P55211 416 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 KRTAP24-1Q3LI83 254 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 CCDC153Q494R4 210 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 C3orf33Q6P1S2 294 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 TMEM108Q6UXF1 575 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 R3HCC1LQ7Z5L2 792 aaKnown RBP18.29■□□□□ 0.52
CPSF7-209ENST00000463244 ZNF100Q8IYN0 542 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 CNPY4Q8N129 248 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
CPSF7-209ENST00000463244 OR5W2Q8NH69 310 aa18.29■□□□□ 0.52
CPSF7-209ENST00000463244 KCNK17Q96T54 332 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms