RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ANPEPP15144 967 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 FASP25445 335 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 YAP1P46937 504 aaKnown RBP13.05□□□□□ -0.32
COL6A1-202ENST00000463060 LIMS1P48059 325 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 RCN1Q15293 331 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 OR1Q1Q15612 314 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 TOMM34Q15785 309 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-202ENST00000463060 OR2T5Q6IEZ7 315 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 PACS2Q86VP3 889 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 RANBP3LQ86VV4 465 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-202ENST00000463060 PQLC1Q8N2U9 271 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 OR2M7Q8NG81 312 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 OR2T29Q8NH02 315 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 NR4A3Q92570 626 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 ABHD17AQ96GS6 310 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 CRELD1Q96HD1 420 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 PRRC1Q96M27 445 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 PIP5K1AQ99755 562 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 FAM173AQ9BQD7 235 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 NMNAT1Q9HAN9 279 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-202ENST00000463060 RNPEPL1Q9HAU8 725 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 TUBA8Q9NY65 449 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-202ENST00000463060 FBXL2Q9UKC9 423 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 ZMIZ1Q9ULJ6 1067 aa13.05□□□□□ -0.32
COL6A1-202ENST00000463060 A0A0B4J2E0 115 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 A0A1B0GWA3 101 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 A0A1B0GX12 115 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 TRAPPC13A5PLN9 417 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 CPSF4LA6NMK7 179 aaKnown RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 H0Y3Z8 333 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 PEX1O43933 1283 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 DEAF1O75398 565 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 CBR3O75828 277 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 GLSO94925 669 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 OR5F1O95221 314 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 NTN1O95631 604 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 ATP6V1G2O95670 118 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 THRBP10828 461 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 FCGR1AP12314 374 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 CD46P15529 392 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 ELAVL4P26378 380 aaKnown RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 RYKP34925 604 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 IDH2P48735 452 aaKnown RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 HYAL4Q2M3T9 481 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 SLC25A53Q5H9E4 307 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 ZNF766Q5HY98 468 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 ZNF613Q6PF04 617 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 LINC00114Q6XXX2 140 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 DEF8Q6ZN54 512 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 Q6ZS92 163 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 GALNTL5Q7Z4T8 443 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 AMIGO2Q86SJ2 522 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 OFCC1Q8IZS5 231 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 ZADH2Q8N4Q0 377 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 OR4C15Q8NGM1 316 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 OR1J4Q8NGS1 313 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 ADAMTS16Q8TE57 1224 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 GNRHR2Q96P88 292 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 PRSS27Q9BQR3 290 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 UBQLN3Q9H347 655 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 ZFP64Q9NPA5 681 aa13.04□□□□□ -0.32
COL6A1-202ENST00000463060 C6orf203Q9P0P8 240 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 KLF13Q9Y2Y9 288 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 MRPS18CQ9Y3D5 142 aaKnown RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
COL6A1-202ENST00000463060 DSPP15924 2871 aaKnown RBP13.03□□□□□ -0.32
COL6A1-202ENST00000463060 MAP1BP46821 2468 aaKnown RBP13.03□□□□□ -0.32
COL6A1-202ENST00000463060 TRAV17A0A0B4J275 112 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 A0A1W2PRQ8 180 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 GNB5O14775 395 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 ZIC3O60481 467 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 LDLRP01130 860 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 RFPL3SP0C7P2 107 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 PGCP20142 388 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 SLC1A3P43003 542 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 CDH12P55289 794 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 SESN3P58005 492 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 GPR85P60893 370 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 CBFBQ13951 182 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 DGCR6Q14129 220 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 QPRTQ15274 297 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 TMEM44Q2T9K0 475 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 PLPPR5Q32ZL2 321 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 WBP2NLQ6ICG8 309 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 ARSKQ6UWY0 536 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 TMEM179BQ7Z7N9 219 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 RBMXL3Q8N7X1 1067 aaKnown RBP13.03□□□□□ -0.32
COL6A1-202ENST00000463060 ZFP62Q8NB50 900 aaPredicted RBP13.03□□□□□ -0.32
COL6A1-202ENST00000463060 TM9SF4Q92544 642 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 C3orf49Q96BT1 292 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 C1GALT1C1Q96EU7 318 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 SLC41A3Q96GZ6 507 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 CENPNQ96H22 339 aaPredicted RBP13.03□□□□□ -0.32
COL6A1-202ENST00000463060 ZNF597Q96LX8 424 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 NPAS1Q99742 590 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 ANKRD19PQ9H560 264 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms