RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PIGTQ969N2 578 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF524Q96C55 264 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 MED18Q9BUE0 208 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF350Q9GZX5 532 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 LAT2Q9GZY6 243 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 SAP130Q9H0E3 1048 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 POLE3Q9NRF9 147 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 C6orf203Q9P0P8 240 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-207ENST00000461798 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.18□□□□□ -1.1
BRCA1-207ENST00000461798 KCNE5Q9UJ90 142 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 CLEC4AQ9UMR7 237 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 PCDHGB4Q9UN71 923 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 GPR52Q9Y2T5 361 aa8.18□□□□□ -1.1
BRCA1-207ENST00000461798 V9GYY5 206 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-207ENST00000461798 MAP1AP78559 2803 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 NPIPA5A0A0B4J1W7 369 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 NPIPA7E9PJI5 369 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 KLF4O43474 513 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 UGT2B17O75795 530 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 PLGP00747 810 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 THBDP07204 575 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 NPIPA8P0DM63 369 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 LBPP18428 481 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 PSMB1P20618 241 aaKnown RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 FPR1P21462 350 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 UQCRC2P22695 453 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 SHC1P29353 583 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 AGTR1P30556 359 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 RAC3P60763 192 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 FOXF1Q12946 379 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 STX3Q13277 289 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 CASP8Q14790 479 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 TOMM34Q15785 309 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 PDCD2Q16342 344 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 ACKR1Q16570 336 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF239Q16600 458 aaKnown RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 DPY19L1Q2PZI1 675 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 TMEM176BQ3YBM2 270 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 CEP85LQ5SZL2 805 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 SHEQ5VZ18 495 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 SAXO2Q658L1 398 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 STK32CQ86UX6 486 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 KRTAP1-3Q8IUG1 177 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 SLC43A2Q8N370 569 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 OR5D16Q8NGK9 328 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 OR5AK3PQ8NH89 298 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 ROBO4Q8WZ75 1007 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 ST8SIA1Q92185 356 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 CPNE4Q96A23 557 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 HDHD5Q9BXW7 423 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 DPY30Q9C005 99 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 KLHL4Q9C0H6 718 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 TMEM185BQ9H7F4 350 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 MEAF6Q9HAF1 191 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 EXD2Q9NVH0 621 aa8.17□□□□□ -1.1
BRCA1-207ENST00000461798 NUP214P35658 2090 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-207ENST00000461798 NF1P21359 2839 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 RNF103-CHMP3A0A140T963 221 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 PRKD3O94806 890 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 NUDT14O95848 222 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 YES1P07947 543 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 UBL4AP11441 157 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 BGNP21810 368 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 SFTPDP35247 375 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 SOAT1P35610 550 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 CLNS1AP54105 237 aaKnown RBP8.16□□□□□ -1.1
BRCA1-207ENST00000461798 SLC18A1P54219 525 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
BRCA1-207ENST00000461798 TXNL4AP83876 142 aaKnown RBP8.16□□□□□ -1.1
BRCA1-207ENST00000461798 BST1Q10588 318 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 SELENBP1Q13228 472 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 SKP2Q13309 424 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 CBFBQ13951 182 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 QPRTQ15274 297 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 ZFHX3Q15911 3703 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 EXOC3L2Q2M3D2 409 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 BEX5Q5H9J7 111 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 TMEM201Q5SNT2 666 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 PDZK1Q5T2W1 519 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 ANKRD34AQ69YU3 496 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 PRSS57Q6UWY2 283 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 EIF3MQ7L2H7 374 aaKnown RBP8.16□□□□□ -1.1
BRCA1-207ENST00000461798 FCRLAQ7L513 359 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 ZNF550Q7Z398 422 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 GABRG1Q8N1C3 465 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 CLEC4FQ8N1N0 589 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 FAM71CQ8NEG0 241 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 ZFP90Q8TF47 636 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 IGFBPL1Q8WX77 278 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 ARL8AQ96BM9 186 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 NEURL3Q96EH8 262 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 PIK3IP1Q96FE7 263 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 REXO5Q96IC2 774 aaKnown RBP8.16□□□□□ -1.1
BRCA1-207ENST00000461798 SLC35G5Q96KT7 338 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 PPP1R36Q96LQ0 422 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 CCDC115Q96NT0 180 aa8.16□□□□□ -1.1
BRCA1-207ENST00000461798 USB1Q9BQ65 265 aaKnown RBP8.16□□□□□ -1.1
BRCA1-207ENST00000461798 TACO1Q9BSH4 297 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms