RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 ARHGAP11BQ3KRB8 267 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 SPANXN4Q5MJ08 99 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 TMEM201Q5SNT2 666 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 OGFOD2Q6N063 350 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 C3orf33Q6P1S2 294 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 TNFAIP8L2Q6P589 184 aaPredicted RBP12.47□□□□□ -0.41
USP4-206ENST00000461553 BEND4Q6ZU67 534 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 OR5W2Q8NH69 310 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 MIPOL1Q8TD10 442 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 GPR119Q8TDV5 335 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 ABHD3Q8WU67 409 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 OSTF1Q92882 214 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 ZBTB9Q96C00 473 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 ARSGQ96EG1 525 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 SRXN1Q9BYN0 137 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 C12orf49Q9H741 205 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 COQ10BQ9H8M1 238 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 PLSCR4Q9NRQ2 329 aa12.47□□□□□ -0.41
USP4-206ENST00000461553 NF1P21359 2839 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 PRSS51A0A1B0GVH4 220 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 ZNF195O14628 629 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 SIAH2O43255 324 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 CSTAP01040 98 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 UBTFL6P0CB48 400 aaPredicted RBP12.46□□□□□ -0.41
USP4-206ENST00000461553 CD53P19397 219 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 S100A3P33764 101 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 CASP9P55211 416 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 SKP2Q13309 424 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 MPP2Q14168 576 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 ZNF141Q15928 474 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 TMEM176BQ3YBM2 270 aaPredicted RBP12.46□□□□□ -0.41
USP4-206ENST00000461553 FAM174BQ3ZCQ3 159 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 FCRLAQ7L513 359 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 ATP6V1C2Q8NEY4 427 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 OIT3Q8WWZ8 545 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 ROBO4Q8WZ75 1007 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 SLC35A5Q9BS91 424 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 LAT2Q9GZY6 243 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 UBTD1Q9HAC8 227 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 PNPOQ9NVS9 261 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 KLHL13Q9P2N7 655 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 MARCOQ9UEW3 520 aaPredicted RBP12.46□□□□□ -0.41
USP4-206ENST00000461553 MKLN1Q9UL63 735 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 WDR45Q9Y484 360 aa12.46□□□□□ -0.41
USP4-206ENST00000461553 CENPVL1A0A0U1RR11 272 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 TMEM120BA0PK00 339 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 TRPC5OSA6NMA1 111 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 ANKRD28O15084 1053 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 UGT2B17O75795 530 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 OR12D1P0DN82 309 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 PGCP20142 388 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 ANXA11P50995 505 aaKnown RBP12.45□□□□□ -0.42
USP4-206ENST00000461553 ADAM8P78325 824 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 CASP8Q14790 479 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 SLC25A53Q5H9E4 307 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 BEX5Q5H9J7 111 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 SAXO2Q658L1 398 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 ANKRD34AQ69YU3 496 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 HEPHL1Q6MZM0 1159 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 STAC2Q6ZMT1 411 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 EIF3MQ7L2H7 374 aaKnown RBP12.45□□□□□ -0.42
USP4-206ENST00000461553 ZNF619Q8N2I2 560 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 TRIML2Q8N7C3 387 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 MGARPQ8TDB4 240 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 XAGE5Q8WWM1 108 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 TMEM234Q8WY98 164 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 ST8SIA1Q92185 356 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 NEURL3Q96EH8 262 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 ZBTB18Q99592 522 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 CCL19Q99731 98 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 TACO1Q9BSH4 297 aaKnown RBP12.45□□□□□ -0.42
USP4-206ENST00000461553 ACTR6Q9GZN1 396 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 POLE3Q9NRF9 147 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 AIG1Q9NVV5 245 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 BTNL2Q9UIR0 455 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 SLC35A3Q9Y2D2 325 aa12.45□□□□□ -0.42
USP4-206ENST00000461553 ESPNB1AK53 854 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 ETV2O00321 342 aaPredicted RBP12.44□□□□□ -0.42
USP4-206ENST00000461553 SDHDO14521 159 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 FCMRO60667 390 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 DIAPH2O60879 1101 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 SCN2BO60939 215 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 ERLIN1O75477 346 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 NTN1O95631 604 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 ALDOCP09972 364 aaKnown RBP12.44□□□□□ -0.42
USP4-206ENST00000461553 FPR1P21462 350 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 NR1H2P55055 460 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 NME5P56597 212 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 TIGD2Q4W5G0 525 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 GPAT3Q53EU6 434 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 ATG16L1Q676U5 607 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 TYW3Q6IPR3 259 aaKnown RBP12.44□□□□□ -0.42
USP4-206ENST00000461553 C20orf204Q6ZNR8 217 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 OLIG3Q7RTU3 272 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 SPATA19Q7Z5L4 167 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 SLC43A2Q8N370 569 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 RAB8BQ92930 207 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 PIGTQ969N2 578 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 ROPN1LQ96C74 230 aa12.44□□□□□ -0.42
USP4-206ENST00000461553 CCDC115Q96NT0 180 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms