RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 YTHDC2Q9H6S0 1430 aaKnown RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 ADGRL3Q9HAR2 1447 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ATP7BP35670 1465 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ERCC6L2Q5T890 1561 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 RIMS1Q86UR5 1692 aaKnown RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 RGPD1P0DJD0 1748 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 C3P01024 1663 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 LRRC37A3O60309 1634 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 NPATQ14207 1427 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ELP1O95163 1332 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 NPIPA5A0A0B4J1W7 369 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 IGHV3-38A0A0C4DH36 116 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 A0A1B0GVL5 298 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 LINC00854A0A1B0GVQ3 168 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 MEIOCA2RUB1 952 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 NPIPA5E9PKD4 350 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 M0QX08 132 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 PDLIM1O00151 329 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ARHGEF9O43307 516 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 NEMFO60524 1076 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 UPK3AO75631 287 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 KRT14P02533 472 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 TPM1P09493 284 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 PNMA6AP0CW24 399 aaPredicted RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 TROVE2P10155 538 aaKnown RBP eCLIP2.47□□□□□ -2.01
HPS3-203ENST00000460822 XRCC1P18887 633 aaPredicted RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 CYP2B6P20813 491 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 TPMTP51580 245 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 CARD18P57730 90 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ERVK-16P61578 105 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 GNB1P62873 340 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 CYCSP99999 105 aaKnown RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 IL9RQ01113 521 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 IL18Q14116 193 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ATXN7L3Q14CW9 347 aaPredicted RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 RAB35Q15286 201 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 CD226Q15762 336 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 UPP1Q16831 310 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 PDZK1Q5T2W1 519 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 SEL1L2Q5TEA6 688 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 AADACL4Q5VUY2 407 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 SLX4IPQ5VYV7 408 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 PRR5LQ6MZQ0 368 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 DOK6Q6PKX4 331 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 C3P1Q6ZMU1 363 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ANKRD37Q7Z713 158 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 GPR137CQ8N3F9 429 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ZNRF1Q8ND25 227 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 BPIFCQ8NFQ6 507 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 OR1L4Q8NGR5 311 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 C11orf45Q8TAV5 145 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 MCUR1Q96AQ8 359 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 GMPPAQ96IJ6 420 aaPredicted RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 C12orf66Q96MD2 445 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 PANX1Q96RD7 426 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 NODALQ96S42 347 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 CHP1Q99653 195 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 TMEM121Q9BTD3 319 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ST6GALNAC5Q9BVH7 336 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 POLR3FQ9H1D9 316 aaPredicted RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 MCCC2Q9HCC0 563 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 DEPPQ9NTK1 212 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 PLCXD1Q9NUJ7 323 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 SEC14L4Q9UDX3 406 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 ZNF639Q9UID6 485 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 KCNG2Q9UJ96 466 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 EXOGQ9Y2C4 368 aaKnown RBP2.47□□□□□ -2.01
HPS3-203ENST00000460822 FBXO7Q9Y3I1 522 aa2.47□□□□□ -2.01
HPS3-203ENST00000460822 VPS37CA5D8V6 355 aaPredicted RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 SPECC1L-ADORA2AF8WAN1 911 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 SLCO1B7G3V0H7 640 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 KIF2AO00139 706 aaPredicted RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 PPIHO43447 177 aaKnown RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 SPOPO43791 374 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 DFNA5O60443 496 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 CDH16O75309 829 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 B3GAT3O94766 335 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 PGK1P00558 417 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 IGLV2-11P01706 119 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 KRT6AP02538 564 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 IGF1P05019 195 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 S100A9P06702 114 aaKnown RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 POU2F1P14859 743 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 PTBP1P26599 531 aaKnown RBP eCLIP2.46□□□□□ -2.02
HPS3-203ENST00000460822 NMT1P30419 496 aaKnown RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 HPCAL1P37235 193 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 FDFT1P37268 417 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 MAGEA1P43355 309 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 BDKRB1P46663 353 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 STK19P49842 368 aaPredicted RBP2.46□□□□□ -2.02
HPS3-203ENST00000460822 SLC7A2P52569 658 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 TPM4P67936 248 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 ZNF85Q03923 595 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 DOC2AQ14183 400 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 MESDQ14696 234 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 ZNF876PQ49A33 203 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 TMEM52BQ4KMG9 183 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 OR4F3Q6IEY1 312 aa2.46□□□□□ -2.02
HPS3-203ENST00000460822 OR2A2Q6IF42 318 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms