RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SHISA5Q8N114 240 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 SLC41A3Q96GZ6 507 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 BMFQ96LC9 184 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF578Q96N58 590 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 KRCC1Q9NPI7 259 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 LIPT1Q9Y234 373 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 HRH3Q9Y5N1 445 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 OBSL1O75147 1896 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 MTCL1Q9Y4B5 1905 aaKnown RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 INMT-MINDY4F8WBC2 141 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 SLC30A4O14863 429 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 P2RX6O15547 441 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 SEMA7AO75326 666 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 LGI1O95970 557 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 CELA2BP08218 269 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 ARSBP15848 533 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 GSTM3P21266 225 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF81P51508 661 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 TRA2BP62995 288 aaKnown RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 PSPHP78330 225 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 PCDH1Q08174 1060 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 UBXN2BQ14CS0 331 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 AMZ1Q400G9 498 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 KLHL22Q53GT1 634 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF782Q6ZMW2 699 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 RNF44Q7L0R7 432 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 SLC38A3Q99624 504 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 C1QTNF6Q9BXI9 259 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 MED28Q9H204 178 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 ELF5Q9UKW6 265 aaPredicted RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 C2orf74A8MZ97 194 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 PLA2G10O15496 165 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 MAT1AQ00266 395 aaKnown RBP14.34□□□□□ -0.11
LMNB1-203ENST00000460265 PLBD1Q6P4A8 553 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 VN1R4Q7Z5H5 301 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 LUZP2Q86TE4 346 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 CPOQ8IVL8 374 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 GPA33Q99795 319 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 AICDAQ9GZX7 198 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 PCDHB16Q9NRJ7 776 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 UBQLN2Q9UHD9 624 aa14.34□□□□□ -0.11
LMNB1-203ENST00000460265 FAM186AA6NE01 2351 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 PEX12O00623 359 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 ALG11Q2TAA5 492 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 ATP6V1C2Q8NEY4 427 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 SLC37A2Q8TED4 501 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 CDCA3Q99618 268 aaPredicted RBP14.33□□□□□ -0.12
LMNB1-203ENST00000460265 PINK1Q9BXM7 581 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 GSDMCQ9BYG8 508 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 BARHL1Q9BZE3 327 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 TMEM27Q9HBJ8 222 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 BRD7Q9NPI1 651 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 KCMF1Q9P0J7 381 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 A0A1W2PQF6 199 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 CSO75390 466 aaKnown RBP14.33□□□□□ -0.12
LMNB1-203ENST00000460265 SLC2A10O95528 541 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 RAB36O95755 333 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 NUDT14O95848 222 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 RAF1P04049 648 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 NUP62P37198 522 aaPredicted RBP14.33□□□□□ -0.12
LMNB1-203ENST00000460265 RAB30Q15771 203 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 EOGTQ5NDL2 527 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 Q6ZS52 159 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 GPR155Q7Z3F1 870 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 OR8K3Q8NH51 312 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 GNPDA2Q8TDQ7 276 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 PITHD1Q9GZP4 211 aaPredicted RBP14.33□□□□□ -0.12
LMNB1-203ENST00000460265 SLC38A1Q9H2H9 487 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 FBXO34Q9NWN3 711 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 FTSJ1Q9UET6 329 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 DOCK8Q8NF50 2099 aa14.33□□□□□ -0.12
LMNB1-203ENST00000460265 A0A1W2PPK0 400 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 GYPBP06028 91 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 HMGA2P52926 109 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 COX10Q12887 443 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 CEP76Q8TAP6 659 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 RSC1A1Q92681 617 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 SIGLEC11Q96RL6 698 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 NT5DC2Q9H857 520 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 MTHFD2LQ9H903 347 aaPredicted RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 SYNPO2LQ9H987 977 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 SESN1Q9Y6P5 492 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 ZNF98A6NK75 572 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 PRG2P13727 222 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 TRHRP34981 398 aaPredicted RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 GBX2P52951 348 aaPredicted RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 SLC36A4Q6YBV0 504 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 RASSF6Q6ZTQ3 369 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 KLHDC7BQ96G42 594 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 AHCYL2Q96HN2 611 aaKnown RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 CD180Q99467 661 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 MENTQ9BUN1 341 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 POLMQ9NP87 494 aaPredicted RBP14.32□□□□□ -0.12
LMNB1-203ENST00000460265 PLCXD1Q9NUJ7 323 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 C2orf92A0A1B0GVN3 265 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 SLC9B1P1A6NJY1 282 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 STX11O75558 287 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 CPMP14384 443 aa14.32□□□□□ -0.12
LMNB1-203ENST00000460265 F8A1P23610 371 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms