RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 RFLNBQ8N5W9 214 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 CDRT4Q8N9R6 151 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 PTP4A1Q93096 173 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 TNFRSF13CQ96RJ3 184 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 RANGRFQ9HD47 186 aaPredicted RBP16.79■□□□□ 0.28
HPS3-202ENST00000460120 ZNF223Q9UK11 482 aaPredicted RBP16.79■□□□□ 0.28
HPS3-202ENST00000460120 EXOGQ9Y2C4 368 aaKnown RBP16.79■□□□□ 0.28
HPS3-202ENST00000460120 C2orf74A8MZ97 194 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 CYR61O00622 381 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 BHLHE40O14503 412 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 ST6GAL1P15907 406 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 NAT1P18440 290 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 BMP8BP34820 402 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 INPP1P49441 399 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 PRPF38BQ5VTL8 546 aaKnown RBP16.79■□□□□ 0.28
HPS3-202ENST00000460120 BMP8AQ7Z5Y6 402 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 SAMD14Q8IZD0 417 aaPredicted RBP16.79■□□□□ 0.28
HPS3-202ENST00000460120 CDK20Q8IZL9 346 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 DEFB119Q8N690 84 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 MCOLN1Q9GZU1 580 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 FN3KQ9H479 309 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 MED31Q9Y3C7 131 aa16.79■□□□□ 0.28
HPS3-202ENST00000460120 A0A0B4J293 547 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 B4DXG7 233 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 GTPBP1O00178 669 aaKnown RBP16.78■□□□□ 0.28
HPS3-202ENST00000460120 APBB3O95704 486 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 IGHA1P01876 353 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 MYL9P24844 172 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 FGF9P31371 208 aaPredicted RBP16.78■□□□□ 0.28
HPS3-202ENST00000460120 PGDP52209 483 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 RACK1P63244 317 aaKnown RBP16.78■□□□□ 0.28
HPS3-202ENST00000460120 FAM53BQ14153 422 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 LCN1P1Q5VSP4 162 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 PARGQ86W56 976 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 AVL9Q8NBF6 648 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 BAHD1Q8TBE0 780 aaPredicted RBP16.78■□□□□ 0.28
HPS3-202ENST00000460120 GFM1Q96RP9 751 aaKnown RBP16.78■□□□□ 0.28
HPS3-202ENST00000460120 CTRCQ99895 268 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 WACQ9BTA9 647 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 PLSCR3Q9NRY6 295 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 FLRT3Q9NZU0 649 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 NLKQ9UBE8 527 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 DTX4Q9Y2E6 619 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 BRWD1Q9NSI6 2320 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 IL9P15248 144 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 AKT2P31751 481 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 PPP3R1P63098 170 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 AMZ1Q400G9 498 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 C6orf183Q5T699 404 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 ZNF57Q68EA5 555 aaPredicted RBP16.78■□□□□ 0.28
HPS3-202ENST00000460120 ASB18Q6ZVZ8 466 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 SYT9Q86SS6 491 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 PEX11GQ96HA9 241 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 ST6GAL2Q96JF0 529 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 C4orf36Q96KX1 117 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 MED18Q9BUE0 208 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 NTMQ9P121 344 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 CYP8B1Q9UNU6 501 aa16.78■□□□□ 0.28
HPS3-202ENST00000460120 FANCMQ8IYD8 2048 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 TNFSF14O43557 240 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 GALR3O60755 368 aaPredicted RBP16.77■□□□□ 0.28
HPS3-202ENST00000460120 ATP1B1P05026 303 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 NGFRP08138 427 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 OR12D2P58182 307 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 CRYZQ08257 329 aaKnown RBP16.77■□□□□ 0.28
HPS3-202ENST00000460120 ASAH1Q13510 395 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 CD200R1LQ6Q8B3 271 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 OAFQ86UD1 273 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 VWA5B2Q8N398 1253 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 GDPD1Q8N9F7 314 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 GATSQ8NAP1 163 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 C17orf47Q8NEP4 570 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 FAM131CQ96AQ9 280 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 CLIP3Q96DZ5 547 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 TMEM27Q9HBJ8 222 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 BABAM2Q9NXR7 383 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 PCOLCE2Q9UKZ9 415 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 A0A1B0GWA3 101 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 FAM86C2PA6NEL3 165 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 GMFGO60234 142 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 PAHP00439 452 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 IGKV1D-16P01601 117 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 THBS1P07996 1170 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 SDR9C7Q8NEX9 313 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 OR5W2Q8NH69 310 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 CHAC2Q8WUX2 184 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 DNAJA4Q8WW22 397 aaPredicted RBP16.77■□□□□ 0.28
HPS3-202ENST00000460120 ANKRD9Q96BM1 317 aaPredicted RBP16.77■□□□□ 0.28
HPS3-202ENST00000460120 ZMYND19Q96E35 227 aaPredicted RBP16.77■□□□□ 0.28
HPS3-202ENST00000460120 DNAJA3Q96EY1 480 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 TEAD3Q99594 435 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 HDHD2Q9H0R4 259 aa16.77■□□□□ 0.28
HPS3-202ENST00000460120 WSB2Q9NYS7 404 aaPredicted RBP16.77■□□□□ 0.28
HPS3-202ENST00000460120 A0A0G2JMP0 313 aa16.76■□□□□ 0.27
HPS3-202ENST00000460120 A0A0X1KG70 313 aa16.76■□□□□ 0.27
HPS3-202ENST00000460120 A0A1W2PRG6 482 aa16.76■□□□□ 0.27
HPS3-202ENST00000460120 IMPA2O14732 288 aa16.76■□□□□ 0.27
HPS3-202ENST00000460120 LYPD3O95274 346 aa16.76■□□□□ 0.27
HPS3-202ENST00000460120 CBX7O95931 251 aa16.76■□□□□ 0.27
HPS3-202ENST00000460120 GABRG2P18507 467 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms