RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 PPP4R4Q6NUP7 873 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 BLOC1S3Q6QNY0 202 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 LRRC74BQ6ZQY2 392 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 ESPNLQ6ZVH7 1005 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 LILRA2Q8N149 483 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 FAM71CQ8NEG0 241 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 OR2V1Q8NHB1 315 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 STON2Q8WXE9 905 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 ZNF524Q96C55 264 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 SPDL1Q96EA4 605 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 MRGPRX4Q96LA9 322 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 KLHL15Q96M94 604 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 THUMPD3Q9BV44 507 aaKnown RBP12.81□□□□□ -0.36
THBS3-204ENST00000460050 PAIP1Q9H074 479 aaKnown RBP12.81□□□□□ -0.36
THBS3-204ENST00000460050 RNF122Q9H9V4 155 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 SLC24A3Q9HC58 644 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 NPHS2Q9NP85 383 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 JKAMPQ9P055 326 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 P2RX2Q9UBL9 471 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 KCNN3Q9UGI6 736 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 FOXD3Q9UJU5 478 aaPredicted RBP12.81□□□□□ -0.36
THBS3-204ENST00000460050 DCTN4Q9UJW0 460 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 SLC35A3Q9Y2D2 325 aa12.81□□□□□ -0.36
THBS3-204ENST00000460050 SPG11Q96JI7 2443 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 CLDN24A6NM45 220 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 ADAMDEC1O15204 470 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 EFNA2O43921 213 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 CXCL13O43927 109 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 BCAS1O75363 584 aaPredicted RBP12.8□□□□□ -0.36
THBS3-204ENST00000460050 AQP8O94778 261 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 NTN1O95631 604 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 FCGR2AP12318 317 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 HOXB9P17482 250 aaPredicted RBP12.8□□□□□ -0.36
THBS3-204ENST00000460050 CAPN3P20807 821 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 SHC1P29353 583 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 PGM1P36871 562 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 DSTNP60981 165 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 EEF1A1P68104 462 aaKnown RBP12.8□□□□□ -0.36
THBS3-204ENST00000460050 SIRPAP78324 504 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 IRX1P78414 480 aaPredicted RBP12.8□□□□□ -0.36
THBS3-204ENST00000460050 KCNJ10P78508 379 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 SQLEQ14534 574 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 AGKQ53H12 422 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 SLC25A53Q5H9E4 307 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 EEF1A1P5Q5VTE0 462 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 HBMQ6B0K9 141 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 VWA1Q6PCB0 445 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 LUZP2Q86TE4 346 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 CNEP1R1Q8N9A8 125 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 ZNF559Q9BR84 538 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 PRRG4Q9BZD6 226 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 PIGMQ9H3S5 423 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.8□□□□□ -0.36
THBS3-204ENST00000460050 PAQR5Q9NXK6 330 aaPredicted RBP12.8□□□□□ -0.36
THBS3-204ENST00000460050 PACSIN3Q9UKS6 424 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 PCDHB14Q9Y5E9 798 aa12.8□□□□□ -0.36
THBS3-204ENST00000460050 ANKRD17O75179 2603 aaKnown RBP12.8□□□□□ -0.36
THBS3-204ENST00000460050 A0A096LPI6 279 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 AGAP5A6NIR3 686 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 CLIC1O00299 241 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 ETV2O00321 342 aaPredicted RBP12.79□□□□□ -0.36
THBS3-204ENST00000460050 DNAJA2O60884 412 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 SYNGR4O95473 234 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 NCF2P19878 526 aaPredicted RBP12.79□□□□□ -0.36
THBS3-204ENST00000460050 PGCP20142 388 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 PEX19P40855 299 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 KIR2DL2P43627 348 aaPredicted RBP12.79□□□□□ -0.36
THBS3-204ENST00000460050 KIR2DL3P43628 341 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 SLC6A8P48029 635 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 CPA2P48052 419 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 SESN3P58005 492 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 PLAURQ03405 335 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 SELENBP1Q13228 472 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 MAPK11Q15759 364 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 ARFGAP2Q8N6H7 521 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 ATP6V1C2Q8NEY4 427 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 ST8SIA1Q92185 356 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 CNOT9Q92600 299 aaKnown RBP12.79□□□□□ -0.36
THBS3-204ENST00000460050 RBM24Q9BX46 236 aaKnown RBP12.79□□□□□ -0.36
THBS3-204ENST00000460050 MTHFD2LQ9H903 347 aaPredicted RBP12.79□□□□□ -0.36
THBS3-204ENST00000460050 MCCC2Q9HCC0 563 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 SLC52A3Q9NQ40 469 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 TMEM45AQ9NWC5 275 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 GALNT8Q9NY28 637 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 MCTS1Q9ULC4 181 aaKnown RBP12.79□□□□□ -0.36
THBS3-204ENST00000460050 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
THBS3-204ENST00000460050 CCDC168Q8NDH2 2452 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 CSMD1Q96PZ7 3565 aa12.79□□□□□ -0.36
THBS3-204ENST00000460050 UQCRHLA0A096LP55 91 aa12.78□□□□□ -0.36
THBS3-204ENST00000460050 A0A0G2JND7 137 aa12.78□□□□□ -0.36
THBS3-204ENST00000460050 SMNDC1O75940 238 aaKnown RBP eCLIP12.78□□□□□ -0.36
THBS3-204ENST00000460050 BCHEP06276 602 aa12.78□□□□□ -0.36
THBS3-204ENST00000460050 CD1EP15812 388 aa12.78□□□□□ -0.36
THBS3-204ENST00000460050 RPS4Y1P22090 263 aaKnown RBP12.78□□□□□ -0.36
THBS3-204ENST00000460050 RYKP34925 604 aa12.78□□□□□ -0.36
THBS3-204ENST00000460050 CRISP3P54108 245 aa12.78□□□□□ -0.36
THBS3-204ENST00000460050 KRTAP10-9P60411 292 aa12.78□□□□□ -0.36
THBS3-204ENST00000460050 SORDQ00796 357 aa12.78□□□□□ -0.36
THBS3-204ENST00000460050 MERTKQ12866 999 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms