RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 BCHEP06276 602 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 PRF1P14222 555 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 IL11P20809 199 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 EIF1AXP47813 144 aaKnown RBP18.65■□□□□ 0.58
VARS-218ENST00000459667 KCNJ10P78508 379 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 PAGE3Q5JUK9 113 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 OR2A2Q6IF42 318 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 FAM71CQ8NEG0 241 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 FNDC9Q8TBE3 224 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 LRRC46Q96FV0 321 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 ADGRG7Q96K78 797 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 MRGPRX4Q96LA9 322 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 TRIM8Q9BZR9 551 aa18.65■□□□□ 0.58
VARS-218ENST00000459667 THUMPD1Q9NXG2 353 aaKnown RBP18.65■□□□□ 0.58
VARS-218ENST00000459667 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 AGAP5A6NIR3 686 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 CLDN24A6NM45 220 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 BCAS1O75363 584 aaPredicted RBP18.64■□□□□ 0.57
VARS-218ENST00000459667 CD1EP15812 388 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 PGCP20142 388 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 CRISP3P54108 245 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 RGNQ15493 299 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 MAPK11Q15759 364 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 CTU2Q2VPK5 515 aaKnown RBP18.64■□□□□ 0.57
VARS-218ENST00000459667 SLC25A53Q5H9E4 307 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 CGB2Q6NT52 195 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 PPP4R4Q6NUP7 873 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 ESPNLQ6ZVH7 1005 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 GDF7Q7Z4P5 450 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 MSRB3Q8IXL7 192 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 DMRTC2Q8IXT2 367 aaPredicted RBP18.64■□□□□ 0.57
VARS-218ENST00000459667 LILRA2Q8N149 483 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 OR10D3Q8NH80 312 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 OR2V1Q8NHB1 315 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 WDR60Q8WVS4 1066 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 PMM1Q92871 262 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 ZNF524Q96C55 264 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 KLHL15Q96M94 604 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 ZNF317Q96PQ6 595 aaPredicted RBP18.64■□□□□ 0.57
VARS-218ENST00000459667 MTHFD2LQ9H903 347 aaPredicted RBP18.64■□□□□ 0.57
VARS-218ENST00000459667 PAQR5Q9NXK6 330 aaPredicted RBP18.64■□□□□ 0.57
VARS-218ENST00000459667 SLC25A37Q9NYZ2 338 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 CALML5Q9NZT1 146 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 SLAMF8Q9P0V8 285 aa18.64■□□□□ 0.57
VARS-218ENST00000459667 A0A0J9YW62 118 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 A0A1W2PP18 115 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 TMEM247A6NEH6 219 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 ETV2O00321 342 aaPredicted RBP18.63■□□□□ 0.57
VARS-218ENST00000459667 TNFSF11O14788 317 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 EFNA2O43921 213 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 DNAJA2O60884 412 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 NTN1O95631 604 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 TFPTP0C1Z6 253 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 FCGR2AP12318 317 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 RPS4Y1P22090 263 aaKnown RBP18.63■□□□□ 0.57
VARS-218ENST00000459667 UQCRC1P31930 480 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 SFTPDP35247 375 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 FADDQ13158 208 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 FBXL19-AS1Q494R0 122 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 PDSS1Q5T2R2 415 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 HBMQ6B0K9 141 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 CMIPQ8IY22 773 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 TSPEARQ8WU66 669 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 SLC38A5Q8WUX1 472 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 ST8SIA1Q92185 356 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 RNASE6Q93091 150 aaKnown RBP18.63■□□□□ 0.57
VARS-218ENST00000459667 TMEM19Q96HH6 336 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 EXOSC3Q9NQT5 275 aaKnown RBP18.63■□□□□ 0.57
VARS-218ENST00000459667 LEF1Q9UJU2 399 aaPredicted RBP18.63■□□□□ 0.57
VARS-218ENST00000459667 ADGRG4Q8IZF6 3080 aa18.63■□□□□ 0.57
VARS-218ENST00000459667 NAV2Q8IVL1 2488 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 A0A1W2PNV4 684 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 GJE1A6NN92 205 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 SYT5O00445 386 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 ANGPT2O15123 496 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 ADAMDEC1O15204 470 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 CXCL13O43927 109 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 CRHP06850 196 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 DBIP07108 87 aaKnown RBP18.62■□□□□ 0.57
VARS-218ENST00000459667 NUDT7P0C024 238 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 IL7RP16871 459 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 PPIBP23284 216 aaKnown RBP18.62■□□□□ 0.57
VARS-218ENST00000459667 SHC1P29353 583 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 DLX5P56178 289 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 EEF1A1P68104 462 aaKnown RBP18.62■□□□□ 0.57
VARS-218ENST00000459667 PLAURQ03405 335 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 SF3A3Q12874 501 aaKnown RBP eCLIP18.62■□□□□ 0.574e-7■■■■■ 37.6
VARS-218ENST00000459667 SELENBP1Q13228 472 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 GNA13Q14344 377 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 EEF1A1P5Q5VTE0 462 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 PEX5LQ8IYB4 626 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 ZNF295-AS1Q8N0V1 137 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 ATP6V1C2Q8NEY4 427 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 ZNF563Q8TA94 476 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 TMEM234Q8WY98 164 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 CNOT9Q92600 299 aaKnown RBP18.62■□□□□ 0.57
VARS-218ENST00000459667 PRRG4Q9BZD6 226 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 NSRP1Q9H0G5 558 aaKnown RBP18.62■□□□□ 0.57
VARS-218ENST00000459667 RNF122Q9H9V4 155 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 JKAMPQ9P055 326 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms