RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 SELENBP1Q13228 472 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 GALEQ14376 348 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 FGFBP1Q14512 234 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 BAK1Q16611 211 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 ZMAT1Q5H9K5 638 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 ZNF362Q5T0B9 420 aaPredicted RBP13.91□□□□□ -0.18
LDLR-202ENST00000455727 SLC35F1Q5T1Q4 408 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 VASNQ6EMK4 673 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 KLBQ86Z14 1044 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 ARL14Q8N4G2 192 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 ATP6V1C2Q8NEY4 427 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 IL17RDQ8NFM7 739 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 OR4C6Q8NH72 309 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 DIRAS2Q96HU8 199 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 TEAD3Q99594 435 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 TIMP4Q99727 224 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 CHRDQ9H2X0 955 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 SYNDIG1Q9H7V2 258 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 PRTFDC1Q9NRG1 225 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 HAO2Q9NYQ3 351 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 SLCO1B1Q9Y6L6 691 aa13.91□□□□□ -0.18
LDLR-202ENST00000455727 THADAQ6YHU6 1953 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 LILRA5A6NI73 299 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 RIIAD1A6NNX1 92 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 PEPDP12955 493 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 CD53P19397 219 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 GPR3P46089 330 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 MAZP56270 477 aaKnown RBP13.9□□□□□ -0.18
LDLR-202ENST00000455727 SCN1BQ07699 218 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 ZC3H14Q6PJT7 736 aaKnown RBP13.9□□□□□ -0.18
LDLR-202ENST00000455727 FAM131AQ6UXB0 335 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 AKAP14Q86UN6 197 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 OR4N2Q8NGD1 307 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 SLC2A12Q8TD20 617 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 GRHL3Q8TE85 626 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 NACC2Q96BF6 587 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 PEX11GQ96HA9 241 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 DGAT2Q96PD7 388 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 ALG8Q9BVK2 526 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 TMED9Q9BVK6 235 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 HDHD5Q9BXW7 423 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.9□□□□□ -0.18
LDLR-202ENST00000455727 MED20Q9H944 212 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 TBC1D17Q9HA65 648 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 CAPN10Q9HC96 672 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 SLC2A4RGQ9NR83 387 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 SACM1LQ9NTJ5 587 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 HCN3Q9P1Z3 774 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 GRIP1Q9Y3R0 1128 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 CLDN16Q9Y5I7 305 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 KNL1Q8NG31 2342 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 ADAM11O75078 769 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 NME1P15531 152 aaKnown RBP13.9□□□□□ -0.18
LDLR-202ENST00000455727 HK1P19367 917 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 SSTR4P31391 388 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 GABRA4P48169 554 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 ATP12AP54707 1039 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 ALG10BQ5I7T1 473 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 ULK3Q6PHR2 472 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 OAFQ86UD1 273 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 MARCH9Q86YJ5 346 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 ZNF614Q8N883 585 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 RCBTB1Q8NDN9 531 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 NEIL3Q8TAT5 605 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 MAP3K3Q99759 626 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 HCAR1Q9BXC0 346 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 ISG20L2Q9H9L3 353 aaKnown RBP13.9□□□□□ -0.18
LDLR-202ENST00000455727 Q9N2J8 555 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 NPAP1Q9NZP6 1156 aa13.9□□□□□ -0.18
LDLR-202ENST00000455727 IGHV1OR15-9A0A0B4J2B8 117 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 CCDC182A6NF36 153 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 POLR1CO15160 346 aaPredicted RBP13.89□□□□□ -0.19
LDLR-202ENST00000455727 ZNF749O43361 778 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 PROS1P07225 676 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 SLC2A5P22732 501 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 PTBP1P26599 531 aaKnown RBP eCLIP13.89□□□□□ -0.192e-11■□□□□ 9.4
LDLR-202ENST00000455727 SLC6A6P31641 620 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 GALNSP34059 522 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 CAPZA2P47755 286 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 RFX3P48380 749 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 HSD17B7P56937 341 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 FUT7Q11130 342 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 BIKQ13323 160 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 METAP1DQ6UB28 335 aaPredicted RBP13.89□□□□□ -0.19
LDLR-202ENST00000455727 GKN2Q86XP6 184 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 LRFN5Q96NI6 719 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 PTCHD1Q96NR3 888 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 DCLRE1CQ96SD1 692 aaKnown RBP13.89□□□□□ -0.19
LDLR-202ENST00000455727 RBCK1Q9BYM8 510 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 CHRNA10Q9GZZ6 450 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 KCNN2Q9H2S1 579 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 TRAV27A0A087WT01 109 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 DAPL1A0PJW8 107 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 HRKO00198 91 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 RNF13O43567 381 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 CT45A8P0DMV1 189 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 CT45A9P0DMV2 189 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 ZNF3P17036 446 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 TPTEP56180 551 aa13.89□□□□□ -0.19
LDLR-202ENST00000455727 ASAH1Q13510 395 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms