RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TRABD2AQ86V40 505 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TDRPQ86YL5 185 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 UBE2J2Q8N2K1 259 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KRTCAP2Q8N6L1 136 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ANKS4BQ8N8V4 417 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CDRT4Q8N9R6 151 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR7A2PQ8NGA2 310 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR52E4Q8NGH9 312 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF75CPQ92670 426 aaPredicted RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HOXB13Q92826 284 aaPredicted RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SOX7Q9BT81 388 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 BEX2Q9BXY8 128 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FUT8Q9BYC5 575 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR11A1Q9GZK7 315 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TUBB1Q9H4B7 451 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LRTM1Q9HBL6 345 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF180Q9UJW8 692 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MRTO4Q9UKD2 239 aaKnown RBP5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CDC42EP3Q9UKI2 254 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ICAM5Q9UMF0 924 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CCL27Q9Y4X3 112 aa5.28□□□□□ -1.56
HLA-DPA3-207ENST00000454398 A0A087WUV0 522 aaPredicted RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 IGHV4-61A0A0C4DH41 118 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 A0A1W2PPM1 405 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR5H1A6NKK0 313 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCT8L1PA6NM43 557 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CLDN24A6NM45 220 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NPIPB8E9PQR5 432 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PRKD3O94806 890 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLITRK5O94991 958 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 C6orf47O95873 294 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 C1QCP02747 245 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PROCP04070 461 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 YES1P07947 543 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NGFRP08138 427 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ITGA5P08648 1049 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ALOX5P09917 674 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FAM153BP0C7A2 387 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 UBTFL6P0CB48 400 aaPredicted RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LAMP1P11279 417 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 UBL4AP11441 157 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 DDX5P17844 614 aaKnown RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SRD5A1P18405 259 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CDH2P19022 906 aaPredicted RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCNA2P20248 432 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ATP6V1C1P21283 382 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 VLDLRP98155 873 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PLAURQ03405 335 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 LGALS3BPQ08380 585 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RASGEF1BQ0VAM2 473 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SELENBP1Q13228 472 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SKP2Q13309 424 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PDE7AQ13946 482 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KIAA0040Q15053 153 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FAM153CQ494X1 144 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SPDYE7PQ495Y7 208 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 VPS26BQ4G0F5 336 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TIGD2Q4W5G0 525 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ATP6AP1LQ52LC2 224 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RFTN2Q52LD8 501 aaPredicted RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CFAP157Q5JU67 520 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 EXOSC6Q5RKV6 272 aaKnown RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FAM120AOSQ5T036 256 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PDSS1Q5T2R2 415 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ABLIM2Q6H8Q1 611 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CASP12Q6UXS9 341 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TRIM46Q7Z4K8 759 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SLC22A9Q8IVM8 553 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 DDIASQ8IXT1 998 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF100Q8IYN0 542 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MUC15Q8N387 334 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF433Q8N7K0 673 aaPredicted RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZNF527Q8NB42 609 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 OR10H5Q8NGA6 315 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ZFP28Q8NHY6 868 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ACTRT2Q8TDY3 377 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 C10orf105Q8TEF2 133 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 MZB1Q8WU39 189 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 HSD17B8Q92506 261 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FAM168AQ92567 244 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 ANP32BQ92688 251 aaKnown RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SORCS2Q96PQ0 1159 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TNFRSF13CQ96RJ3 184 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 CCT7Q99832 543 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 RHNO1Q9BSD3 238 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 BTBD2Q9BX70 525 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SHARPINQ9H0F6 387 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 REEP4Q9H6H4 257 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 SEC61A2Q9H9S3 476 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 C3orf14Q9HBI5 128 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 BARX1Q9HBU1 254 aaPredicted RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 NGBQ9NPG2 151 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 UBQLN4Q9NRR5 601 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 GLRX2Q9NS18 164 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 FAIMQ9NVQ4 179 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 C1orf109Q9NX04 203 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 PAQR5Q9NXK6 330 aaPredicted RBP5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 TAS2R7Q9NYW3 318 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KLHL9Q9P2J3 617 aa5.27□□□□□ -1.57
HLA-DPA3-207ENST00000454398 KCNE5Q9UJ90 142 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms