RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 EFNA2O43921 213 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 LINC00032P0C843 101 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 ME2P23368 584 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 EIF1P41567 113 aaKnown RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 ZNF41P51814 821 aaPredicted RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 SEC24CP53992 1094 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 MANFP55145 182 aaKnown RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 BSPH1Q075Z2 132 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 KIAA0040Q15053 153 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 TSC22D1Q15714 1073 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 ZNF239Q16600 458 aaKnown RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 CHRFAM7AQ494W8 412 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 NOXRED1Q6NXP6 359 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 NUFIP2Q7Z417 695 aaKnown RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 CDRT4Q8N9R6 151 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 CEP70Q8NHQ1 597 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 ABHD3Q8WU67 409 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 ROBO4Q8WZ75 1007 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 CPNE4Q96A23 557 aaPredicted RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 GIMAP5Q96F15 307 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 ZNF764Q96H86 408 aaPredicted RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 METTL2AQ96IZ6 378 aaKnown RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 PPP1R36Q96LQ0 422 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 KLHL15Q96M94 604 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 NUF2Q9BZD4 464 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 BARX1Q9HBU1 254 aaPredicted RBP10.36□□□□□ -0.75
HERC3-207ENST00000452979 TIGARQ9NQ88 270 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 UBQLN4Q9NRR5 601 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 GIMAP2Q9UG22 337 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 FREM1Q5H8C1 2179 aa10.36□□□□□ -0.75
HERC3-207ENST00000452979 A0A1W2PP18 115 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 ZNF814B7Z6K7 855 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 SHOX2O60902 331 aaPredicted RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 ADAM11O75078 769 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 NDUFS7O75251 213 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 PRKD3O94806 890 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 KCNK2O95069 426 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 F12P00748 615 aaPredicted RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 ADAP00813 363 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 YES1P07947 543 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 VIMP08670 466 aaKnown RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 PRPH2P23942 346 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 IL32P24001 234 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 ITGADQ13349 1161 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 EXOSC6Q5RKV6 272 aaKnown RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 ALKBH2Q6NS38 261 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 ZCCHC12Q6PEW1 402 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 Q6ZSR9 355 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 ZNF551Q7Z340 670 aaPredicted RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 ATG4DQ86TL0 474 aaPredicted RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 DTX2Q86UW9 622 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 TUSC5Q8IXB3 177 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 DDIASQ8IXT1 998 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 KBTBD8Q8NFY9 601 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 B4GALNT2Q8NHY0 566 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 CDC26Q8NHZ8 85 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 KISS1RQ969F8 398 aaPredicted RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 THOC1Q96FV9 657 aaKnown RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 REXO5Q96IC2 774 aaKnown RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 EGLN2Q96KS0 407 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 KLHDC3Q9BQ90 382 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 POTEKPQ9BYX7 375 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 TMEM185BQ9H7F4 350 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 MEAF6Q9HAF1 191 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 CISD1Q9NZ45 108 aaKnown RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 GDF2Q9UK05 429 aaPredicted RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 POLR3HQ9Y535 204 aaPredicted RBP10.35□□□□□ -0.75
HERC3-207ENST00000452979 USH1CQ9Y6N9 552 aa10.35□□□□□ -0.75
HERC3-207ENST00000452979 A0A096LNT2 108 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 GOLGA8QA0A0J9YX86 632 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 GOLGA8OA6NCC3 632 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 NPIPB8E9PQR5 432 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 GOLGA8NF8WBI6 632 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 SCDO00767 359 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 SDHDO14521 159 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 LSM1O15116 133 aaKnown RBP10.34□□□□□ -0.75
HERC3-207ENST00000452979 HDAC3O15379 428 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 PHF1O43189 567 aaPredicted RBP10.34□□□□□ -0.75
HERC3-207ENST00000452979 GPRIN2O60269 458 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 TBX19O60806 448 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 RSL1D1O76021 490 aaKnown RBP10.34□□□□□ -0.75
HERC3-207ENST00000452979 NTN1O95631 604 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 CHEK2O96017 543 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 FAM157CP0CG43 387 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 ACP2P11117 423 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 ELK4P28324 431 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 SHC1P29353 583 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 FRKP42685 505 aaPredicted RBP10.34□□□□□ -0.75
HERC3-207ENST00000452979 HSPB3Q12988 150 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 NRF1Q16656 503 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 DUSP5Q16690 384 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 SLC9B1Q4ZJI4 515 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 Q6ZT83 130 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 SSX8Q7RTT4 187 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.34□□□□□ -0.75
HERC3-207ENST00000452979 ZAR1Q86SH2 424 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 KIRREL3Q8IZU9 778 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 GATSQ8NAP1 163 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 SLC16A11Q8NCK7 471 aa10.34□□□□□ -0.75
HERC3-207ENST00000452979 NUP43Q8NFH3 380 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms