RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 IGLV3-27P01718 113 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 F7P08709 466 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CT45A8P0DMV1 189 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CT45A9P0DMV2 189 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 IGHV4-38-2P0DP08 117 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CLUP10909 449 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 SLC2A3P11169 496 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 MT3P25713 68 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 FCGR2BP31994 310 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CCR1P32246 355 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CD70P32970 193 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 ADRA1AP35348 466 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 DLSTP36957 453 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 PSMD8P48556 350 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 ARRB1P49407 418 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 SGSHP51688 502 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 DCDC1P59894 354 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 HERV-K104P61576 105 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 RPS24P62847 133 aaKnown RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 IL9RQ01113 521 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CDR2Q01850 454 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CHIT1Q13231 466 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 P2RY6Q15077 328 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CST6Q15828 149 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 HNRNPA1L2Q32P51 320 aaKnown RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 ACCSLQ4AC99 568 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CT45A2Q5DJT8 189 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 MS4A13Q5J8X5 152 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 FGD3Q5JSP0 725 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 RABGAP1LQ5R372 815 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CAPN13Q6MZZ7 669 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 PMF1Q6P1K2 205 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 RFPL4BQ6ZWI9 263 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 TAC4Q86UU9 113 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CENPLQ8N0S6 344 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 RFLNBQ8N5W9 214 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 TEX26Q8N6G2 289 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 POC1AQ8NBT0 407 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 RELL2Q8NC24 303 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 OR52M1Q8NGK5 317 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 OR6M1Q8NGM8 313 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 WFDC5Q8TCV5 224 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 APOBEC4Q8WW27 367 aaKnown RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 NELFBQ8WX92 580 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 SERAC1Q96JX3 654 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 BTN2A3PQ96KV6 586 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 PCDHB18PQ96TA0 734 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 LPAR4Q99677 370 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CCM2Q9BSQ5 444 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 RMND5AQ9H871 391 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 EVA1AQ9H8M9 152 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 POPDC2Q9HBU9 364 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 UBE2TQ9NPD8 197 aaPredicted RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 DYRK4Q9NR20 520 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 GDF3Q9NR23 364 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 TXLNGQ9NUQ3 528 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 TECRQ9NZ01 308 aaKnown RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 COX16Q9P0S2 106 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 TAAR2Q9P1P5 351 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 MAN1B1Q9UKM7 699 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 DIMT1Q9UNQ2 313 aaKnown RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 PLCL2Q9UPR0 1127 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 ERVW-1Q9UQF0 538 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CHMP2BQ9UQN3 213 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 AKAP13Q12802 2813 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CNOT1A5YKK6 2376 aaKnown RBP3.76□□□□□ -1.81
LINC00393-202ENST00000452852 SPTBN2O15020 2390 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 CACNA1EQ15878 2313 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 BPTFQ12830 3046 aa3.76□□□□□ -1.81
LINC00393-202ENST00000452852 GON4LQ3T8J9 2241 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 DOCK4Q8N1I0 1966 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ACACBO00763 2458 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 A0A087WUV0 522 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 A0A087WZ39 114 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 TRABD2BA6NFA1 517 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 E9PAM4 449 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 P2RX6O15547 441 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 RRP8O43159 456 aaKnown RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 CIDEAO60543 219 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 LRCH4O75427 683 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 MTX2O75431 263 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 KRT36O76013 467 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 OR4F21O95013 312 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 EML2O95834 649 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 KRT8P05787 483 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 IGHV4-34P06331 123 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 GPIP06744 558 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 HIST1H2AGP0C0S8 130 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ATP6V1C1P21283 382 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 PAX7P23759 505 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 NUDT1P36639 197 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 SLC6A8P48029 635 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 NUMBP49757 651 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 CCR4P51679 360 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 STX17P56962 302 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 NME3Q13232 169 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ZNF177Q13360 481 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ELAVL3Q14576 367 aaKnown RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 OR1C1Q15619 314 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms