RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 RDH11Q8TC12 318 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC25A43Q8WUT9 341 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC35B4Q969S0 331 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 CPNE4Q96A23 557 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 P2RY11Q96G91 374 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 CELF6Q96J87 481 aaKnown RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 RANBP9Q96S59 729 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAP3K3Q99759 626 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 TOLLIPQ9H0E2 274 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLITRK2Q9H156 845 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 UPF3AQ9H1J1 476 aaKnown RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 TLE6Q9H808 572 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 WDR54Q9H977 334 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 GDF3Q9NR23 364 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 SIRT7Q9NRC8 400 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMEM74BQ9NUR3 256 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ASIC5Q9NY37 505 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 IL36GQ9NZH8 169 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 GHRLQ9UBU3 117 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF282Q9UDV7 671 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 NXT1Q9UKK6 140 aaKnown RBP3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAN1B1Q9UKM7 699 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 POMT2Q9UKY4 750 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 AP3M1Q9Y2T2 418 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 KLHDC2Q9Y2U9 406 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 CHST2Q9Y4C5 530 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 FADS3Q9Y5Q0 445 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 PTGDR2Q9Y5Y4 395 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 ATP10AO60312 1499 aa3.96□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRAG1Q86YV5 1406 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PTPRUQ92729 1446 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 BLOC1S5-TXNDC5H3BN57 136 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 GAPDHSO14556 408 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 TFECO14948 347 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZBTB5O15062 677 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 B4GALT5O43286 388 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PSTPIP1O43586 416 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PCDH7O60245 1069 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SC5DO75845 299 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 CRYABP02511 175 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRKCGP05129 697 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 H1F0P07305 194 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC35E2BP0CK96 405 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC35E2P0CK97 266 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SMIM10L1P0DMW3 83 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 MBL2P11226 248 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PGCP20142 388 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 RAB4AP20338 218 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 IMPDH1P20839 514 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 TACR3P29371 465 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 ALDH3A1P30838 453 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 HNRNPH1P31943 449 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 CCKBRP32239 447 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 GTF2H1P32780 548 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 TNFSF8P32971 234 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 GNPDA1P46926 289 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 HNRNPH2P55795 449 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 RPS4XP62701 263 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 RPS6P62753 249 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 CX3CL1P78423 397 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SCRN3Q0VDG4 424 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 TSPAN31Q12999 210 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPR50Q13585 617 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 GRB7Q14451 532 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 OPCMLQ14982 345 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 ATXN7L3Q14CW9 347 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 TSC22D1Q15714 1073 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 CTF1Q16619 201 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 KCTD19Q17RG1 926 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 KLHL38Q2WGJ6 581 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC22A6Q4U2R8 563 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 TIGD2Q4W5G0 525 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 LY6G6FQ5SQ64 297 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 MARCH8Q5T0T0 291 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 BEND3Q5T5X7 828 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRAMEF17Q5VTA0 474 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 BSPRYQ5W0U4 402 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 REEP3Q6NUK4 255 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 VWA1Q6PCB0 445 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 RHBDF2Q6PJF5 856 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 NAPRTQ6XQN6 538 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF621Q6ZSS3 439 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 NET1Q7Z628 596 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 ANKRD37Q7Z713 158 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC35F2Q8IXU6 374 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 IQCKQ8N0W5 287 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 KLHDC1Q8N7A1 406 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR2AK2Q8NG84 335 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR8K1Q8NGG5 319 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR2L8Q8NGY9 312 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 FGFBP3Q8TAT2 258 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 FAM110BQ8TC76 370 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 LGALS14Q8TCE9 139 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 DTD1Q8TEA8 209 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 DNAJB3Q8WWF6 145 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 ASB10Q8WXI3 467 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 NR4A3Q92570 626 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 RND1Q92730 232 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PIGTQ969N2 578 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 ISOC2Q96AB3 205 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms