RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 CYP7B1O75881 506 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ZNF682O95780 498 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 LINGO3P0C6S8 592 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 DPP4P27487 766 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 GDF1P27539 372 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 RFC3P40938 356 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ZNF136P52737 540 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 RGS8P57771 180 aaPredicted RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 PMP22Q01453 160 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 KCNC4Q03721 635 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 FLOT2Q14254 428 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ZNF324BQ6AW86 544 aaPredicted RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 CYP2R1Q6VVX0 501 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 SIAH3Q8IW03 269 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 LSMEM1Q8N8F7 131 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 GEMIN6Q8WXD5 167 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 TMEM234Q8WY98 164 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ST8SIA1Q92185 356 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ZBTB8AQ96BR9 441 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 PYURFQ96I23 114 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 TPD52L3Q96J77 140 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 HSH2DQ96JZ2 352 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 LRGUKQ96M69 825 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 RAB3IPQ96QF0 476 aaPredicted RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 MED17Q9NVC6 651 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 LUZP4Q9P127 313 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 TESQ9UGI8 421 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 SH3GLB1Q9Y371 365 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 IGSF10Q6WRI0 2623 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 TCRBV5S2A0A599 114 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 FAM166BA8MTA8 275 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 FAM47E-STBD1D6RA91 191 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 TFECO14948 347 aaPredicted RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 RRP9O43818 475 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ZIC3O60481 467 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 PRKD3O94806 890 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 NUDT14O95848 222 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 IGHG3P01860 377 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 GKN3PP0CG01 181 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 HOXB6P17509 224 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ADH6P28332 368 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 EIF1P41567 113 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 MAGEA5P43359 124 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 CCR4P51679 360 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ZNF41P51814 821 aaPredicted RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ALDH6A1Q02252 535 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 SLC10A1Q14973 349 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 QPRTQ15274 297 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 TMEM44Q2T9K0 475 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 PLPPR5Q32ZL2 321 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 IFI44LQ53G44 452 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 SLC25A53Q5H9E4 307 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 FKBP9P1Q75LS8 142 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 VTCN1Q7Z7D3 282 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 RANBP3LQ86VV4 465 aaPredicted RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 OR6T1Q8NGN1 323 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 FAR1Q8WVX9 515 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 SNRNP40Q96DI7 357 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 KLHDC3Q9BQ90 382 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 WFDC6Q9BQY6 131 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 ZNF559Q9BR84 538 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 POLR2J2Q9GZM3 115 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 POLR2J3Q9H1A7 115 aaKnown RBP10.51□□□□□ -0.73
SCN9A-204ENST00000452182 DKKL1Q9UK85 242 aa10.51□□□□□ -0.73
SCN9A-204ENST00000452182 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 LINC01387J3KSC0 135 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 AP3D1O14617 1153 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 FRS3O43559 492 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 TPST2O60704 377 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 CIB2O75838 187 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 NTN1O95631 604 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 SEMG1P04279 462 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 UMPSP11172 480 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 PRG2P13727 222 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 ZNF17P17021 662 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 PRKCAP17252 672 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 RYKP34925 604 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 SLC1A3P43003 542 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 COPZ1P61923 177 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 NFATC3Q12968 1075 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 TOMM34Q15785 309 aaPredicted RBP10.5□□□□□ -0.73
SCN9A-204ENST00000452182 NPTX1Q15818 432 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 KRTCAP3Q53RY4 240 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 CMPK2Q5EBM0 449 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 C1orf146Q5VVC0 180 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 ENPP6Q6UWR7 440 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 ARSKQ6UWY0 536 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 CARM1Q86X55 608 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 LACC1Q8IV20 430 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 GTPBP8Q8N3Z3 284 aaPredicted RBP10.5□□□□□ -0.73
SCN9A-204ENST00000452182 CISD2Q8N5K1 135 aaKnown RBP10.5□□□□□ -0.73
SCN9A-204ENST00000452182 FAM86B1Q8N7N1 296 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 FAM83FQ8NEG4 500 aaPredicted RBP10.5□□□□□ -0.73
SCN9A-204ENST00000452182 OR4D11Q8NGI4 311 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 OR10Q1Q8NGQ4 319 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 NR4A3Q92570 626 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 MRGPRX4Q96LA9 322 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 UGT2B28Q9BY64 529 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 TRIM2Q9C040 744 aa10.5□□□□□ -0.73
SCN9A-204ENST00000452182 MAGIXQ9H6Y5 334 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms