RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 MANSC1Q9H8J5 431 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 NKIRAS1Q9NYS0 192 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 PLEKHA6Q9Y2H5 1048 aa17.34■□□□□ 0.37
USP40-207ENST00000450940 CENPVL1A0A0U1RR11 272 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 GJE1A6NN92 205 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 KLF11O14901 512 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 PLGP00747 810 aaPredicted RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 PGRP06401 933 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 PABPC4LP0CB38 370 aaKnown RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 SFTPDP35247 375 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 CASP9P55211 416 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 CTBP2P56545 445 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 TXNL4AP83876 142 aaKnown RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 CBFBQ13951 182 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 QPRTQ15274 297 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 MAPK14Q16539 360 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 ZNF239Q16600 458 aaKnown RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 ATAD3BQ5T9A4 648 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 FBXW10Q5XX13 1052 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 GTF2IRD2BQ6EKJ0 949 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 TYW3Q6IPR3 259 aaKnown RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 TNFAIP8L2Q6P589 184 aaPredicted RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 OLIG3Q7RTU3 272 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 GTF2IRD2Q86UP8 949 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 ZNF614Q8N883 585 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 GLB1L3Q8NCI6 653 aaPredicted RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 FAM71CQ8NEG0 241 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 RNF128Q8TEB7 428 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 RAB8BQ92930 207 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 CPNE4Q96A23 557 aaPredicted RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 ROPN1LQ96C74 230 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 ALPK1Q96QP1 1244 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 SLC35A5Q9BS91 424 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 GP6Q9HCN6 339 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 TIGARQ9NQ88 270 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 MARCOQ9UEW3 520 aaPredicted RBP17.33■□□□□ 0.36
USP40-207ENST00000450940 CLEC4AQ9UMR7 237 aa17.33■□□□□ 0.36
USP40-207ENST00000450940 GOLGA8QA0A0J9YX86 632 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 PRAMEF27A3QJZ7 478 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 GOLGA8OA6NCC3 632 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 DEFB108AA8MXU0 73 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 GOLGA8NF8WBI6 632 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 SIAH2O43255 324 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 ATE1O95260 518 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 CSTAP01040 98 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 RAF1P04049 648 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 CRYGSP22914 178 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 KHKP50053 298 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 NME5P56597 212 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 SELENBP1Q13228 472 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 TMEM176BQ3YBM2 270 aaPredicted RBP17.32■□□□□ 0.36
USP40-207ENST00000450940 FRRS1Q6ZNA5 592 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 EIF3MQ7L2H7 374 aaKnown RBP17.32■□□□□ 0.36
USP40-207ENST00000450940 RFWD2Q8NHY2 731 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 ST8SIA1Q92185 356 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 MARK4Q96L34 752 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 OR52E6Q96RD3 313 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 THUMPD3Q9BV44 507 aaKnown RBP17.32■□□□□ 0.36
USP40-207ENST00000450940 SRXN1Q9BYN0 137 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 COQ10BQ9H8M1 238 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 KLHL28Q9NXS3 571 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 ZNF226Q9NYT6 803 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 WDR45Q9Y484 360 aa17.32■□□□□ 0.36
USP40-207ENST00000450940 FREM1Q5H8C1 2179 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 CCDC154A6NI56 674 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 HMGN4O00479 90 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 C1QCP02747 245 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 KITP10721 976 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 IDO1P14902 403 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 AGTR1P30556 359 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 CHI3L1P36222 383 aaPredicted RBP17.31■□□□□ 0.36
USP40-207ENST00000450940 PGM1P36871 562 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 KCNJ5P48544 419 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 RNPS1Q15287 305 aaKnown RBP17.31■□□□□ 0.36
USP40-207ENST00000450940 PDCD4Q53EL6 469 aaKnown RBP17.31■□□□□ 0.36
USP40-207ENST00000450940 PPP4R4Q6NUP7 873 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 C22orf34Q6ZV56 151 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 MAVSQ7Z434 540 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 TMCO5AQ8N6Q1 288 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 TRIML2Q8N7C3 387 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 PIWIL2Q8TC59 973 aaKnown RBP17.31■□□□□ 0.36
USP40-207ENST00000450940 ZFP90Q8TF47 636 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 ROBO4Q8WZ75 1007 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 ZG16BQ96DA0 208 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 PANX1Q96RD7 426 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 INPP5KQ9BT40 448 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 MED18Q9BUE0 208 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 SLC35A3Q9Y2D2 325 aa17.31■□□□□ 0.36
USP40-207ENST00000450940 PGCP20142 388 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 CDKN2CP42773 168 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 RAC3P60763 192 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 POU4F3Q15319 338 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 TIGD2Q4W5G0 525 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 AGBL2Q5U5Z8 902 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 STAC2Q6ZMT1 411 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 BEND4Q6ZU67 534 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 ZNF619Q8N2I2 560 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 ZNF75CPQ92670 426 aaPredicted RBP17.3■□□□□ 0.36
USP40-207ENST00000450940 ARL8AQ96BM9 186 aa17.3■□□□□ 0.36
USP40-207ENST00000450940 REXO5Q96IC2 774 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms