RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ZNF660Q6AZW8 331 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 OR5M10Q6IEU7 315 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 IL20RBQ6UXL0 311 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 SLC36A4Q6YBV0 504 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 DMRTC2Q8IXT2 367 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 KLHDC8AQ8IYD2 350 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 RAB42Q8N4Z0 105 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 OR52I1Q8NGK6 324 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 HUS1BQ8NHY5 278 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 POLDIP3Q9BY77 421 aaKnown RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 MTG2Q9H4K7 406 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 ZDHHC6Q9H6R6 413 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 ZDHHC4Q9NPG8 344 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 EXOSC3Q9NQT5 275 aaKnown RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 PIPOXQ9P0Z9 390 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 CA5BQ9Y2D0 317 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 TRDV1A0A1B0GX56 115 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 TMEM200CA6NKL6 621 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 PRAMEF2O60811 474 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 PFN3P60673 137 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 RAB5BP61020 215 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 RAB40BQ12829 278 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 ALKBH1Q13686 389 aaKnown RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 GANABQ14697 944 aaKnown RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 UBXN2BQ14CS0 331 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 RNF212Q495C1 297 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 FAM76BQ5HYJ3 339 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 SSX9Q7RTT3 188 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 TRAM1L1Q8N609 369 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 OTUB2Q96DC9 234 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 RSPRY1Q96DX4 576 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 TMEM68Q96MH6 324 aa12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 TEX10Q9NXF1 929 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 STOX2Q9P2F5 926 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 ATXN7L1Q9ULK2 861 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-204ENST00000449372 XIRP2A4UGR9 3374 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 C2orf92A0A1B0GVN3 265 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 LCMT2O60294 686 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SOX14O95416 240 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 EIF4EP06730 217 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 CEBPBP17676 345 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 DHRS7BQ6IAN0 325 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 WDR53Q7Z5U6 358 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SLITRK4Q8IW52 837 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SAMD12Q8N8I0 201 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 ENKD1Q9H0I2 346 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 TVP23BQ9NYZ1 205 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 PLEKHM1Q9Y4G2 1056 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 GALR3O60755 368 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SLCO2B1O94956 709 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 C1GALT1C1LP0DN25 315 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 MANFP55145 182 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 FAM26EQ8N5C1 309 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SPSB2Q99619 263 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 MAP3K3Q99759 626 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 TMPRSS13Q9BYE2 586 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 CHST8Q9H2A9 424 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SLC25A32Q9H2D1 315 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SEBOXQ9HB31 216 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 KLHL28Q9NXS3 571 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 WNT6Q9Y6F9 365 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 A0A1B0GWJ7 208 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 OR2W5A6NFC9 320 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 TMEM229AB2RXF0 380 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 CLN5O75503 358 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 RPN2P04844 631 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 RBMS1P29558 406 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 RFX3P48380 749 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 PCP4P48539 62 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 RAP2BP61225 183 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 ECH1Q13011 328 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SNTB2Q13425 540 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 CCINQ13939 588 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 SEZ6L2Q6UXD5 910 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 CEACAM20Q6UY09 585 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 BOLLQ8N9W6 283 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 RAB7BQ96AH8 199 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 C20orf85Q9H1P6 137 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 CA10Q9NS85 328 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 PPP1R14DQ9NXH3 145 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 FLVCR2Q9UPI3 526 aa12.54□□□□□ -0.4
SYNGAP1-204ENST00000449372 MEX3AA1L020 520 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 E7EQ34 232 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 SOX30O94993 753 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 GIPP09681 153 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 HPGDP15428 266 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 PSMA6P60900 246 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 SLBPQ14493 270 aaKnown RBP eCLIP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 INSL4Q14641 139 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 EIF2S3LQ2VIR3 472 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 GRASPQ7Z6J2 395 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 OR56A3Q8NH54 315 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 MS4A4EQ96PG1 132 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms