RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 UBL4AP11441 157 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 ELK4P28324 431 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 CHI3L1P36222 383 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 KHKP50053 298 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 AQP5P55064 265 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 RPS3AP61247 264 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 SORDQ00796 357 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 FOXF1Q12946 379 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 FGFBP1Q14512 234 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 ATAD3BQ5T9A4 648 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 BLOC1S3Q6QNY0 202 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 LRRC74BQ6ZQY2 392 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 EIF3MQ7L2H7 374 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 KIF18BQ86Y91 864 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 MIER2Q8N344 545 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 TRIML2Q8N7C3 387 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 OR2V1Q8NHB1 315 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 FAM222BQ8WU58 562 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 SMPDL3BQ92485 455 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 PMM1Q92871 262 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 MRGPRX4Q96LA9 322 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 ZNF559Q9BR84 538 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 THUMPD3Q9BV44 507 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 RBM24Q9BX46 236 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 MTHFD2LQ9H903 347 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 INTS9Q9NV88 658 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 ARGLU1Q9NWB6 273 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 ZNF446Q9NWS9 450 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 PACSIN3Q9UKS6 424 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 WDR45Q9Y484 360 aa12.61□□□□□ -0.39
RTFDC1-204ENST00000449062 PRR14LQ5THK1 2151 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 AGAP5A6NIR3 686 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 CLDN24A6NM45 220 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 EEF1E1-BLOC1S5C9J1V9 151 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 EEF1E1O43324 174 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 CSTAP01040 98 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 CHRM4P08173 479 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 TFPTP0C1Z6 253 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 EPXP11678 715 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 EIF1AXP47813 144 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 SESN3P58005 492 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 KCNJ10P78508 379 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 MYBPHQ13203 477 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 QPRTQ15274 297 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 GTDC1Q4AE62 458 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 FAM214BQ7L5A3 538 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 P4HA3Q7Z4N8 544 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 LUZP2Q86TE4 346 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 ZZZ3Q8IYH5 903 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 ZNF619Q8N2I2 560 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 ZNF614Q8N883 585 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 LINC01560Q8TB33 94 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 STON2Q8WXE9 905 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 LRRC46Q96FV0 321 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 ITCHQ96J02 903 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 KLHL15Q96M94 604 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 PAIP1Q9H074 479 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 QRSL1Q9H0R6 528 aaKnown RBP12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 TMEM185BQ9H7F4 350 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 TPT1P8Q9HAU6 139 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 PLSCR4Q9NRQ2 329 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 ACER3Q9NUN7 267 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 TMEM45AQ9NWC5 275 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 PAQR5Q9NXK6 330 aaPredicted RBP12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 CELSR1Q9NYQ6 3014 aa12.6□□□□□ -0.39
RTFDC1-204ENST00000449062 TNFSF11O14788 317 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 KRT75O95678 551 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 CD8BP10966 210 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 RPS4Y1P22090 263 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 CARD18P57730 90 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 FAM27E3Q08E93 113 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 SGCBQ16585 318 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 TMEM176BQ3YBM2 270 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 TIGD2Q4W5G0 525 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 HBMQ6B0K9 141 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 HMGN2P46Q86SG4 172 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 PNPT1Q8TCS8 783 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 ST8SIA1Q92185 356 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 CNOT9Q92600 299 aaKnown RBP12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 AURKBQ96GD4 344 aaPredicted RBP12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 COQ10BQ9H8M1 238 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 RASSF1Q9NS23 344 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 SLAMF8Q9P0V8 285 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 PCDHB14Q9Y5E9 798 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 GMEB1Q9Y692 573 aa12.59□□□□□ -0.39
RTFDC1-204ENST00000449062 TUBAL3A6NHL2 446 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 A6NNC1 897 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 POLR3GO15318 223 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 SS18L1O75177 396 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 NUDT14O95848 222 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 UBTFL6P0CB48 400 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 BMP2P12643 396 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 ETFAP13804 333 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 ME2P23368 584 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 CBFBQ13951 182 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 TESK1Q15569 626 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 GPAT3Q53EU6 434 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms