RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TRAV27A0A087WT01 109 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 SYNDIG1LA6NDD5 238 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 FAM183AA6NL82 134 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 SNTNA6NMZ2 147 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 AGRPO00253 132 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 PPICP45877 212 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 SERPINB10P48595 397 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 TUBA1BP68363 451 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 KLHL26Q53HC5 615 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 TMEM71Q6P5X7 295 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 LINC00114Q6XXX2 140 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 TUBA1AQ71U36 451 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 OR4C6Q8NH72 309 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 SLC46A1Q96NT5 459 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 AKIP1Q9NQ31 210 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 POLR1CO15160 346 aaPredicted RBP16.05■□□□□ 0.16
SMC6-206ENST00000446852 SIGLEC6O43699 453 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 GPX5O75715 221 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 HMGN1P05114 100 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 ELAVL1Q15717 326 aaKnown RBP16.05■□□□□ 0.16
SMC6-206ENST00000446852 ZSWIM7Q19AV6 140 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 HLA-BQ31612 363 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 BTLAQ7Z6A9 289 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 CPOQ8IVL8 374 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 CDK20Q8IZL9 346 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 OR52L1Q8NGH7 329 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 DUSP23Q9BVJ7 150 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 CTSFQ9UBX1 484 aa16.05■□□□□ 0.16
SMC6-206ENST00000446852 SOCS6O14544 535 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 GNB5O14775 395 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 RORAP35398 523 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 RBM34P42696 430 aaKnown RBP16.04■□□□□ 0.16
SMC6-206ENST00000446852 FOXL2P58012 376 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 NSDHLQ15738 373 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 CD226Q15762 336 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 PLK5Q496M5 336 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 OR2G6Q5TZ20 316 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 NXNL2Q5VZ03 156 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 ULK3Q6PHR2 472 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 SMARCD3Q6STE5 483 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 GATSQ8NAP1 163 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 OR6Q1Q8NGQ2 317 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 PIGKQ92643 395 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 RFKQ969G6 155 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 NUDT9Q9BW91 350 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 VN1R1Q9GZP7 353 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 FBXO8Q9NRD0 319 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 CFAP54Q96N23 3096 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 A0A1W2PQM1 296 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 EFCAB7A8K855 629 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 WWP2O00308 870 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 PTP4A3O75365 173 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 BMP7P18075 431 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 MYL12AP19105 171 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 ENDOUP21128 410 aaKnown RBP16.04■□□□□ 0.16
SMC6-206ENST00000446852 DBPQ10586 325 aaPredicted RBP16.04■□□□□ 0.16
SMC6-206ENST00000446852 MLLT11Q13015 90 aaPredicted RBP16.04■□□□□ 0.16
SMC6-206ENST00000446852 FHL1Q13642 323 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 C1DQ13901 141 aaKnown RBP16.04■□□□□ 0.16
SMC6-206ENST00000446852 NR0B2Q15466 257 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 SLC35F1Q5T1Q4 408 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 FNDC7Q5VTL7 733 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 LINC00299Q6ZSB3 139 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 LNX2Q8N448 690 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 OR4F15Q8NGB8 312 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 OR51A7Q8NH64 312 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 ADIPOR1Q96A54 375 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 RACGAP1Q9H0H5 632 aa16.04■□□□□ 0.16
SMC6-206ENST00000446852 WDFY3Q8IZQ1 3526 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 TECTAO75443 2155 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 CLDN25C9JDP6 229 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 OIP5O43482 229 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 RCBTB2O95199 551 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 IL33O95760 270 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 LIMS3P0CW19 117 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 LIMS4P0CW20 117 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 PNLIPP16233 465 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 ZXDAP98168 799 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 APOOLQ6UXV4 268 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 CXXC5Q7LFL8 322 aaKnown RBP16.03■□□□□ 0.16
SMC6-206ENST00000446852 MAML2Q8IZL2 1156 aaPredicted RBP16.03■□□□□ 0.16
SMC6-206ENST00000446852 FAM71CQ8NEG0 241 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 KBTBD8Q8NFY9 601 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 GAL3ST4Q96RP7 486 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 SLC22A11Q9NSA0 550 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 NDUFB11Q9NX14 153 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 SUSD2Q9UGT4 822 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 MKL2Q9ULH7 1088 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 IRGMA1A4Y4 181 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 TOX3O15405 576 aaPredicted RBP16.03■□□□□ 0.16
SMC6-206ENST00000446852 DYRK3O43781 588 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 HTR1FP30939 366 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 CD79BP40259 229 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 CRYZQ08257 329 aaKnown RBP16.03■□□□□ 0.16
SMC6-206ENST00000446852 TIMM50Q3ZCQ8 353 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 YOD1Q5VVQ6 348 aaPredicted RBP16.03■□□□□ 0.16
SMC6-206ENST00000446852 LIPKQ5VXJ0 399 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 DESI1Q6ICB0 168 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 RPL13AP3Q6NVV1 102 aa16.03■□□□□ 0.16
SMC6-206ENST00000446852 PLBD1Q6P4A8 553 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms