RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 C1DQ13901 141 aaKnown RBP8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 PLK5Q496M5 336 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 FCRLBQ6BAA4 426 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 B3GLCTQ6Y288 498 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 QSOX2Q6ZRP7 698 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 WDR5BQ86VZ2 330 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 KMT5CQ86Y97 462 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 GRAMD2AQ8IUY3 354 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 AMER2Q8N7J2 671 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 NANOGP1Q8N7R0 232 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 BBS1Q8NFJ9 593 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 PHOSPHO1Q8TCT1 267 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 DYNC2LI1Q8TCX1 351 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 FGF11Q92914 225 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 OR6C1Q96RD1 312 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 ADOQ96SZ5 270 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 CENPOQ9BU64 300 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 CTSFQ9UBX1 484 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 SUSD2Q9UGT4 822 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 ITGB1BP2Q9UKP3 347 aa8.77□□□□□ -1.01
COL6A4P1-201ENST00000446690 C2orf92A0A1B0GVN3 265 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 PATE3B3GLJ2 98 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 NPIPB9F8W1W9 429 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 POLR1CO15160 346 aaPredicted RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 HMGN1P05114 100 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 HOXA6P31267 233 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 RHAGQ02094 409 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZNF829Q3KNS6 432 aaPredicted RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 HLA-DQA1Q5Y7H0 255 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 DESI1Q6ICB0 168 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 PLBD1Q6P4A8 553 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 C16orf87Q6PH81 154 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 KIRREL2Q6UWL6 708 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 DCDC5Q6ZRR9 648 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 MRGPREQ86SM8 312 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 OAFQ86UD1 273 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 CPOQ8IVL8 374 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 TMCO5AQ8N6Q1 288 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 OR4C6Q8NH72 309 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZNF721Q8TF20 911 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 GATAD2BQ8WXI9 593 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 SLC46A1Q96NT5 459 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 OPALINQ96PE5 141 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 NUDT9Q9BW91 350 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 VN1R1Q9GZP7 353 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 RERGLQ9H628 205 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 MED20Q9H944 212 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 EXOSC4Q9NPD3 245 aaKnown RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 DIMT1Q9UNQ2 313 aaKnown RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 EML5Q05BV3 1969 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 IGKV3D-11A0A0A0MRZ8 115 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 A0A1W2PQM1 296 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 KDM4EB2RXH2 506 aaPredicted RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 GTPBP1O00178 669 aaKnown RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 WWP2O00308 870 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 SCDO00767 359 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 REM1O75628 298 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 RCBTB2O95199 551 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 DDAH2O95865 285 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 SCG5P05408 212 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 NGFRP08138 427 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 PPICP45877 212 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 BCAP31P51572 246 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 NR0B1P51843 470 aaKnown RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 SLC16A1P53985 500 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 FXYD6P3P58550 94 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 RAB40BQ12829 278 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 ELAVL1Q15717 326 aaKnown RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 SSX1Q16384 188 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 OR2G6Q5TZ20 316 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 ULK3Q6PHR2 472 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 THSD4Q6ZMP0 1018 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 LANCL3Q6ZV70 420 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 TMPRSS11FQ6ZWK6 438 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 USP43Q70EL4 1123 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 LHFPL3Q86UP9 236 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 LSMEM1Q8N8F7 131 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZNF527Q8NB42 609 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZSCAN1Q8NBB4 408 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 PROKR2Q8NFJ6 384 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 OR4F15Q8NGB8 312 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 BRIX1Q8TDN6 353 aaKnown RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 DAZLQ92904 295 aaKnown RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 RFKQ969G6 155 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 BORCS5Q969J3 196 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 LCORQ96JN0 433 aaPredicted RBP8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 TNFRSF13CQ96RJ3 184 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 NEURL2Q9BR09 285 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 UBQLN4Q9NRR5 601 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 SEMA5BQ9P283 1151 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 TMEM5Q9Y2B1 443 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 CORINQ9Y5Q5 1042 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 PMF1-BGLAPU3KQ54 211 aa8.76□□□□□ -1.01
COL6A4P1-201ENST00000446690 IGHV3-20A0A0C4DH32 117 aa8.75□□□□□ -1.01
COL6A4P1-201ENST00000446690 TCRBV16S1A1N1A0A5B0 115 aa8.75□□□□□ -1.01
COL6A4P1-201ENST00000446690 SOCS6O14544 535 aa8.75□□□□□ -1.01
COL6A4P1-201ENST00000446690 UTS2O95399 124 aa8.75□□□□□ -1.01
COL6A4P1-201ENST00000446690 GUSBP08236 651 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms