RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 NDRG3Q9UGV2 375 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 EDARQ9UNE0 448 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 SLC35A3Q9Y2D2 325 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 EMC9Q9Y3B6 208 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 USH1CQ9Y6N9 552 aa16.88■□□□□ 0.29
ATPAF2-201ENST00000444058 RFXANKO14593 260 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 TNFSF11O14788 317 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 EFNA2O43921 213 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 CXCL13O43927 109 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 SS18L1O75177 396 aaPredicted RBP16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 KRT75O95678 551 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 ZCCHC18P0CG32 403 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 NID1P14543 1247 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 CD79BP40259 229 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 SLC6A8P48029 635 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 MRPL19P49406 292 aaKnown RBP16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 HPCAP84074 193 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 FUT5Q11128 374 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 SELENBP1Q13228 472 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 QPRTQ15274 297 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 TOMM34Q15785 309 aaPredicted RBP16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 NDUFAF6Q330K2 333 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 ZNF474Q6S9Z5 364 aaPredicted RBP16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 FRRS1Q6ZNA5 592 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 OR6K3Q8NGY3 331 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 LRRC8CQ8TDW0 803 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 TMEM234Q8WY98 164 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 OSTF1Q92882 214 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 NINJ1Q92982 152 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 CPNE4Q96A23 557 aaPredicted RBP16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 GP6Q9HCN6 339 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 PLSCR4Q9NRQ2 329 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 ARGLU1Q9NWB6 273 aaPredicted RBP16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 PROCRQ9UNN8 238 aa16.87■□□□□ 0.29
ATPAF2-201ENST00000444058 CENPVL1A0A0U1RR11 272 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 PRAMEF27A3QJZ7 478 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 HMGB1P1B2RPK0 211 aaPredicted RBP16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 C9JVG2 144 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 DIAPH2O60879 1101 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 PLGP00747 810 aaPredicted RBP16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 PGCP20142 388 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 DNAJA1P31689 397 aaKnown RBP16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 CPOXP36551 454 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 PGM1P36871 562 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 CDKN2CP42773 168 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 RNF144AP50876 292 aaPredicted RBP16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 SIRPAP78324 504 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 TESK1Q15569 626 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 MAPK14Q16539 360 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 TTMPQ5BVD1 217 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 CMIPQ8IY22 773 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 MIER2Q8N344 545 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 TMCO5AQ8N6Q1 288 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 GOLGA6L1Q8N7Z2 621 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 THUMPD3Q9BV44 507 aaKnown RBP16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 RMND5AQ9H871 391 aa16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 EXOSC3Q9NQT5 275 aaKnown RBP16.86■□□□□ 0.29
ATPAF2-201ENST00000444058 SH3D21A4FU49 640 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 H6PDO95479 791 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 OPN1LWP04000 364 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 UBTFL6P0CB48 400 aaPredicted RBP16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 H2AFXP16104 143 aaPredicted RBP16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 SFTPDP35247 375 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 CCR4P51679 360 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 POLR2JP52435 117 aaKnown RBP16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 CTBP2P56545 445 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 KCNJ10P78508 379 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 FAM27E3Q08E93 113 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 ZNF239Q16600 458 aaKnown RBP16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 GPAT3Q53EU6 434 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 SPNS3Q6ZMD2 512 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 LRRC74BQ6ZQY2 392 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 RFWD2Q8NHY2 731 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 RNF128Q8TEB7 428 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 ZFP90Q8TF47 636 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 REXO5Q96IC2 774 aaKnown RBP16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 OPN3Q9H1Y3 402 aaPredicted RBP16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 MTHFD2LQ9H903 347 aaPredicted RBP16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 TCF7L2Q9NQB0 619 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 MPDZO75970 2070 aa16.85■□□□□ 0.29
ATPAF2-201ENST00000444058 FAM234BA2RU67 622 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 AGAP5A6NIR3 686 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 CASKO14936 926 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 POLR3GO15318 223 aaPredicted RBP16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 CYP7B1O75881 506 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 GSNP06396 782 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 POU2F1P14859 743 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 SHC1P29353 583 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 UGT2B10P36537 528 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 SESN3P58005 492 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 IRX1P78414 480 aaPredicted RBP16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 CHRNEQ04844 493 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 RNPS1Q15287 305 aaKnown RBP16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 TMEM176BQ3YBM2 270 aaPredicted RBP16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 TIGD2Q4W5G0 525 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 PPP4R4Q6NUP7 873 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 C3orf33Q6P1S2 294 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 OLIG3Q7RTU3 272 aa16.84■□□□□ 0.29
ATPAF2-201ENST00000444058 CDC20BQ86Y33 519 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms