RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-208	ENST00000443203	DHFR2	Q86XF0	187 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	ULK2	Q8IYT8	1036 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	EID3	Q8N140	333 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	CLIP4	Q8N3C7	705 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	FAM71C	Q8NEG0	241 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	ZNF563	Q8TA94	476 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	TMEM234	Q8WY98	164 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	CNOT9	Q92600	299 aa	Known RBP	12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	SNRNP40	Q96DI7	357 aa	Known RBP	12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	TPD52L3	Q96J77	140 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	TRIM15	Q9C019	465 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	LDAH	Q9H6V9	325 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	ZNF703	Q9H7S9	590 aa	Predicted RBP	12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	OLAH	Q9NV23	265 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	RLIM	Q9NVW2	624 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	DNAJB12	Q9NXW2	375 aa	Known RBP	12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	ACTR3B	Q9P1U1	418 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	FBXL2	Q9UKC9	423 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	ICAM5	Q9UMF0	924 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	SAMD4A	Q9UPU9	718 aa	Known RBP	12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	SLC9A8	Q9Y2E8	581 aa		12.82	□□□□□ -0.36
NELFA-208	ENST00000443203	WIPF3	A6NGB9	483 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	NPIPA5	E9PKD4	350 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	ARPC2	O15144	300 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	TPST1	O60507	370 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	CDC40	O60508	579 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	ZNF682	O95780	498 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	LGI1	O95970	557 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	HPN	P05981	417 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	LINGO3	P0C6S8	592 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	RFPL3S	P0C7P2	107 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	HK1	P19367	917 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	RYK	P34925	604 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	RGS8	P57771	180 aa	Predicted RBP	12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	NDUFAF6	Q330K2	333 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	GLYR1	Q49A26	553 aa	Predicted RBP	12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	KRTCAP3	Q53RY4	240 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	MTX3	Q5HYI7	312 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	PGM2L1	Q6PCE3	622 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	FKBP9P1	Q75LS8	142 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	OR52E4	Q8NGH9	312 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	OR14L1P	Q8NHC6	308 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	FAR1	Q8WVX9	515 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	POP5	Q969H6	163 aa	Known RBP	12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	ZBTB8A	Q96BR9	441 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	CCDC124	Q96CT7	223 aa	Known RBP	12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	ASB9	Q96DX5	294 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	ARSG	Q96EG1	525 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	C1GALT1C1	Q96EU7	318 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	DEFB127	Q9H1M4	99 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	UBQLN3	Q9H347	655 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	EXO5	Q9H790	373 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	ACKR4	Q9NPB9	350 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	TAS2R10	Q9NYW0	307 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	NPIPA1	Q9UND3	350 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	SLC5A6	Q9Y289	635 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	HIVEP3	Q5T1R4	2406 aa		12.81	□□□□□ -0.36
NELFA-208	ENST00000443203	CNTRL	Q7Z7A1	2325 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	EXPH5	Q8NEV8	1989 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	C17orf51	A8MQB3	221 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	OIP5	O43482	229 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	CIB2	O75838	187 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	LDLR	P01130	860 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	GKN3P	P0CG01	181 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	CD247	P20963	164 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	EIF1	P41567	113 aa	Known RBP	12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	GLIPR1L2	Q4G1C9	344 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	RNFT1	Q5M7Z0	435 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	ASRGL1	Q7L266	308 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	RANBP3L	Q86VV4	465 aa	Predicted RBP	12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	GPR119	Q8TDV5	335 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	NR4A3	Q92570	626 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	OR2B2	Q9GZK3	357 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	ZDHHC11	Q9H8X9	412 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	DCAF13	Q9NV06	445 aa	Known RBP	12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	MED17	Q9NVC6	651 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	ASF1B	Q9NVP2	202 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	ERRFI1	Q9UJM3	462 aa	Predicted RBP	12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	VDAC3	Q9Y277	283 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	SH3GLB1	Q9Y371	365 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	CHST2	Q9Y4C5	530 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	CRYBG3	Q68DQ2	2970 aa		12.8	□□□□□ -0.36
NELFA-208	ENST00000443203	TRGV5	A0A0B4J1U4	118 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	LINC01387	J3KSC0	135 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	FAAH	O00519	579 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	AP3D1	O14617	1153 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	HCN1	O60741	890 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	BCAS1	O75363	584 aa	Predicted RBP	12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	CLDN1	O95832	211 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	ADH6	P28332	368 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	IDH2	P48735	452 aa	Known RBP	12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	MS4A2	Q01362	244 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	EPS8	Q12929	822 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	QPRT	Q15274	297 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	IFI44L	Q53G44	452 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	RAET1L	Q5VY80	246 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	ZNF787	Q6DD87	383 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	LCN8	Q6JVE9	175 aa		12.79	□□□□□ -0.36
NELFA-208	ENST00000443203	AAGAB	Q6PD74	315 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms